Populus trichocarpa (black cottonwood): 7475138
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Entry
7475138 CDS
T01077
Name
(RefSeq) probable RNA 3'-terminal phosphate cyclase-like protein isoform X2
KO
K11108
RNA 3'-terminal phosphate cyclase-like protein
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
7475138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
7475138
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
90S particles
Other 90S particles
7475138
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RTC
RTC_insert
Motif
Other DBs
NCBI-GeneID:
7475138
NCBI-ProteinID:
XP_002298266
UniProt:
B9GHM4
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All DBs
Position
1:22385266..22389000
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AA seq
376 aa
AA seq
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MGKGSYKKLKGSQNFRQRLILATLSATPIIIKGIRANDMLPGLRLHEVSLLRLLEKISDD
CVVKINETGTMVQYKPGILMGGRHLVHDCGESRAIGYFLEPLLVLGLFSKKALSIRLKGI
TNDSNDPCVDTFRSTTLPLLKQFGVPSEGLELKIESRGAPPHGGGEVLLSIPNIQSLTAV
TWIDEGMVRRIRGVTFSTRVSSQFENTMIHAARGIFNHLLPDVHIFTDHKAGPQAGNSPG
YGISLVAETTSGCFISANTAVSYARTEDGGMEDEKGELMPPEDVGEQIASVLLQEIEQGG
VVDTTHQGLLFLLCALCPQDVSKIRVGKLIPHGIEVLRLIRDFLGVKFVIKPDPSTGTVI
LKCVGSGLKNLSRKSS
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggggaagggaagctacaagaagctaaagggtagccaaaacttccgtcaaagactgata
ttagcgacgctctccgccacacctatcattatcaagggcattcgagccaatgacatgctt
cctggcctccgcctccatgaagtttctcttcttcgcctcctcgagaagatttctgatgac
tgtgttgtcaaaatcaatgaaacaggaacaatggtccagtacaagcctgggattttgatg
ggtgggagacatcttgtgcacgattgtggtgaaagtcgagctattgggtatttcttggag
ccattacttgttcttgggttgttttcgaaaaaggccctttcgataagactcaaaggaatt
acaaatgattctaatgacccatgtgttgacacttttcgttccactaccttaccattattg
aagcaatttggagttccatcagaaggattggagctgaaaatagaaagtcgtggtgctcca
ccacatggtggcggagaagttcttttatcaattcccaatattcaaagtttaacggcagtc
acatggattgatgagggaatggttaggaggattagaggggtgactttctcaaccagagta
tcttctcagtttgagaatactatgatacatgctgctcgaggaatctttaatcatttgctt
cctgatgtccacatatttactgatcataaagctggtccacaagctggaaattcacctggt
tatggaatatccttggttgcggaaactacttccggttgcttcatctctgctaatactgca
gtttcttatgcacgaacggaagatggtggaatggaagatgagaaaggagagctgatgcct
ccagaagatgttggtgagcaaattgcttctgttctccttcaggagattgaacagggtgga
gttgtagatacaacacaccagggtttgttgtttcttctgtgtgcattatgtccacaagat
gtttcaaagattcgcgtagggaagcttataccccatggaatagaagtactaaggctcatc
agagattttttgggtgttaaattcgtcattaagccagatccatccacagggacagtcata
ctcaaatgtgtgggaagtggattgaagaatctttctagaaagagttcttga
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