Populus trichocarpa (black cottonwood): 7475186
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Entry
7475186 CDS
T01077
Name
(RefSeq) CLP protease regulatory subunit CLPX1, mitochondrial isoform X1
KO
K03544
ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pop03110
]
7475186
Chaperones and folding catalysts [BR:
pop03110
]
Heat shock proteins
HSP100
7475186
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
AAA
ClpB_D2-small
AAA_5
AAA_22
Mg_chelatase
RuvB_N
AAA_14
MCM
Sigma54_activat
AAA_16
AAA_7
Sigma54_activ_2
IstB_IS21
ABC_tran
T2SSE
AAA_18
AAA_28
TsaE
nSTAND3
RNA_helicase
DEAD
ResIII
AAA_33
AAA_24
NACHT
AAA_29
Motif
Other DBs
NCBI-GeneID:
7475186
NCBI-ProteinID:
XP_052303268
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All DBs
Position
15:825855..833316
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AA seq
572 aa
AA seq
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MAFAAVRCKPTKVTASQFRYFMFNYMHVGSRLSSSHCANKIATRDDHFANTPYHFTSFKP
VSLRGEFVEKSTQLLENMRSSSSSSDRNWRETVSSNSGGGSNYGDPPEVWQPPGDGVAKM
RVSDGGGDFKVWSRGGSGSKDGYWGGSNLGSSFPTPKEICKALDNFVIGQRRAKKVLSVA
VYNHYKRIYLESVKKWSNTDSGNEKSDIMDDDGVELEKSNILLMGPTGSGKTLLAKTLAR
FVNVPFVIADATTLTQARYVGEDVESILYKLLTAADYNVAAAQQGIIYIDEIDKITKKAE
SVNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDL
EKTISERRQDSSIGFGAPVRANMRTGGVTSTAVTSSLLETAESSDLVSYGLIPEFVGRFP
ILVSLAALTEDQLVQVLTEPKNALGKQYKKLFQMNDVKLHVTENALRSIARKAITKNTGA
RALRSILENILMDSMYEIPDVRTGDDIIDAVVVDEVAIGSEERSVGAKILYGRGALDHYL
SKEKLKCSKKTTEGSDGEPEVESELPSIVASM
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgctgcagttagatgcaaacccactaaagtaactgcttctcaattcagatac
ttcatgttcaattacatgcatgtgggcagtcgcttgtctagctctcactgtgctaacaaa
attgcaacacgggatgaccattttgcaaatactccttatcacttcacttctttcaagccc
gtttcacttcgtggggaatttgttgaaaagagtactcaattgttggaaaatatgagaagt
agcagcagtagttctgatagaaattggagagagacagtgagtagtaatagtggtggtggg
tctaattatggcgacccaccagaggtgtggcaaccacctggtgatggtgttgcaaagatg
agggtgagtgatggaggcggggatttcaaggtatggagtagaggtgggtctggttcaaag
gatgggtactggggtgggtcaaatctggggagtagttttccaacaccgaaagagatttgt
aaggcacttgataactttgttattggacaacggagagctaagaaggtgctctcagttgct
gtttacaatcattacaagagaatctatctagagtctgttaaaaaatggtccaacacagat
tcaggcaatgaaaaatcagatatcatggatgatgacggagttgaacttgagaaaagtaac
attcttctaatggggccaacaggttcagggaagacattacttgccaaaaccttggcacgg
tttgtgaatgttcccttcgttattgcagatgcaactactttgactcaggcaagatatgtt
ggggaggatgtggagtcaatattgtacaaactactgacggctgctgactataatgtggca
gctgctcagcagggcatcatttacattgatgaaattgacaagatcacgaaaaaggctgag
agtgttaacattagcagagatgtgtcaggagagggtgttcagcaagcattattgaaaatg
cttgaaggaacaatagtcaatgttccagagaagggagctcggaagcatcctagaggtgac
aatattcagatcgacaccaaggatattctttttatatgtggtggtgcctttattgatttg
gagaagaccatttctgagaggcgccaagattcttcgatagggtttggtgcaccagtacgt
gcaaacatgaggacaggtggtgttacgagtactgctgtgacatcatctttattggagact
gctgaaagcagcgatcttgtttcgtatggtttgatacctgaatttgttggaagatttccc
atccttgtcagtttagcagctctcactgaggatcaacttgtccaggttctgacagaacca
aagaatgcccttgggaagcaatataagaagttgttccaaatgaatgatgtcaagctacat
gtcacggaaaatgctttgagatcaattgctagaaaagcaataaccaaaaatactggggct
cgggccttgcggtccatattagagaatatcttgatggattccatgtatgagattcctgat
gttagaacaggggatgatattatagatgccgttgtagttgatgaagtggctattggatct
gaggaacgcagcgttggagccaaaatcctctatggaaggggtgcgttggatcactatctt
tccaaagaaaaattaaagtgttccaagaaaaccacggagggttctgatggagaaccagag
gtggaatcagagcttccttcgatagttgccagcatgtaa
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