Populus trichocarpa (black cottonwood): 7475373
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Entry
7475373 CDS
T01077
Name
(RefSeq) carbamoyl-phosphate synthase large chain, chloroplastic
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00220
Arginine biosynthesis
pop00240
Pyrimidine metabolism
pop00250
Alanine, aspartate and glutamate metabolism
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
7475373
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
7475373
00220 Arginine biosynthesis
7475373
Enzymes [BR:
pop01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
7475373
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GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_4
ATPgrasp_Ter
ATP-grasp_3
ATP-grasp_5
Epimerase
Motif
Other DBs
NCBI-GeneID:
7475373
NCBI-ProteinID:
XP_052312233
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Position
10:complement(3373629..3379961)
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AA seq
1182 aa
AA seq
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MNCCLNRYHCSHSLSFIHQNKASSSSSSSFSLSKPNRFRLFFSQTNYPRRITSSSSIRCC
SSIVRQETEKRSVKTGAGKRTDLKKILILGAGPIVIGQACEFDYSGTQACKALREEGYDV
ILINSNPATIMTDPDLADRTYVAPLTPEVVEQVVAKERPDAILPTMGGQTALNLAVALAA
NGVLEKYNVELIGAKLNAIKKAEDRDLFKQAMENIGLKTPPSGIGSTLEECIRISEEVIG
EFPLIIRPAFTLGGSGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMR
DLSDNVVIICSIENIDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIKIIREIGVECGGS
NVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK
TPASFEPSIDYVVTKIPRFAFEKFPGSQPTLTTQMKSVGESMALGRTFQESFQKAVRSLE
CGYSGWGCAQVAELDWDLEQLKYNLRVPNPDRIHAIYAAMKRGMKVDEIHELSFVDKWFL
TQLKELVDVEQYLMTRSLSHLTKDDFIEVKKHGYSDKQIAFAIKSTEKEVRSQRISFGVT
PSYKRVDTCAAEFEANTPYMYSSYDAECESAPTKKKKVLILGGGPNRIGQGIEFDYCCCH
ASFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIELERPDGIIIQFGG
QTPLKLALPIQHYLDKHKPLSASGAGHVRIWGTSPDSIDAAEDRERFNVIIKELNIEQPK
GGIAKSEADALAIAADIGYPVVVRPSYVLGGRAMEIVYSDDKLVKYLENAVEVDPQRPVL
IDKYLSDAVEIDVDALADSHGDVVIGGVMEHIEQAGVHSGDSACILPTQTISSSCLNTIQ
LWTTKLAKSLNVCGLMNCQYAITMGGDVFLLEANPRASRTIPFVSKAIGHPLAKYAALVM
SGKSLNEIGFTKEVIPAHVAVKEAVLPFDKFPGCDVLLGPEMRSTGEVMGIDYLVAIAFA
KAQIAAGQKLPLSGTVFLSLNDLTKSHLERLAKAFLGLGFRIVSTSGTAHFLELKGISVD
RVLKMHEGRPHAGDILANGQIQLMVITSSGDSLDQIDGRQLRRMALAYKIPIITTVSGAL
ATANAIEKLKTCKIEVMALQDFFNVEPQKDDSKSLQPASSSL
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgaactgttgcttaaaccgttaccactgctctcactccctctctttcatccaccaaaac
aaagcttcctcctcctcctcctcctccttttctctctcaaaacccaatcgtttccgcctc
ttcttttcgcaaactaactacccgagaagaatcacctcttcttcctccattcgctgctgc
agcagcatcgtccgccaagaaacagagaagaggagcgtgaaaacaggggctggaaagcgc
accgacttgaagaaaatcttgattcttggtgctggacccattgtgattggtcaagcatgc
gagttcgattactccggtactcaagcatgcaaggctttgcgagaggaagggtatgatgtt
attttgataaactccaaccctgccactatcatgactgacccggacttggctgaccgcact
tatgttgcgccattgacgccggaggtcgttgaacaggtggtggctaaagaacgtcccgat
gccattttgcccaccatgggaggccagacagcgttgaatcttgctgtggctttagcggca
aatggggttttagagaaatataatgttgaattgattggagctaaactgaatgccattaaa
aaagctgaagatagagatcttttcaagcaggctatggagaatataggactcaaaactccg
ccttctggcattgggagcacgcttgaggagtgcattcgcatatcggaggaagttattggg
gagtttccacttattattcggcctgcttttacgttgggtggctctggaggtgggattgct
tacaataaagaggagttcgaggctatttgtaaggcagggttagctgctagtttaacctca
caggttttggtggagaagtcactcttggggtggaaagagtacgagttagaagtaatgcgc
gatttgtctgataatgttgttatcatttgctccattgagaatattgatccaatgggtgtg
catacaggggattcaattactgttgctcctgcacagactctgactgacaaggagtaccag
aggttgagagattattctattaagattataagggagattggagtggagtgtggaggatct
aatgtgcagtttgctgttaatcctgtggatggtgaggttatggtgattgagatgaatcct
agggtgtccaggtcttctgctctggcttccaaggctactggttttcccatagccaagatg
gctgctaagttgtcggtggggtattcattggaccagattcctaatgatatcacaaagaag
acccctgcgagtttcgagccttctattgactatgtggtgactaagatcccccgatttgca
tttgagaagttccccggttctcagccaacccttacaacccagatgaaatctgttggtgag
tccatggcattaggccgaacatttcaagaatcatttcaaaaagctgttcgatcattggag
tgtggatactcaggatggggatgtgcgcaagttgccgaacttgactgggacttggaacaa
ttgaagtacaacctccgagttccaaatcctgatcgcattcatgccatttatgcagcaatg
aaaaggggtatgaaagttgatgaaatccatgaactgagctttgtggataaatggttcctc
actcagcttaaagagctggtagatgtggaacaatatcttatgactaggagtttgtctcat
ctgacaaaggatgacttcatcgaggtcaaaaagcatggctacagtgataagcagatagca
tttgctattaaatcaacagagaaggaagtccggtcacaacggatttcttttggagttact
ccgtcgtataaaagggttgatacttgtgctgcagagtttgaggccaatactccttacatg
tactcctcctatgatgcagagtgtgaatcagctcccaccaaaaagaagaaggttttgatt
ttaggtggaggacccaaccgtataggtcagggaattgagtttgattactgttgttgccat
gcatctttttccctgcagagtgcaggatatgagacaattatgatgaattcaaatcctgag
acagtgtccacagattatgacacaagcgatcgtctctactttgaacccttgacagttgaa
gatgttctgaatgtaattgaattggaaagacctgatgggatcattatacagtttggaggt
caaacacccctgaagctggctctgcccatccagcattatttggacaagcataagcctctt
agtgccagcggagctgggcatgtacgcatatggggcacatcacctgattctattgatgct
gctgaggacagagaaaggttcaatgtgattataaaagagttaaacattgaacaaccaaaa
ggaggcattgctaagagtgaggctgatgctttagccattgcagcagacataggttaccca
gttgttgtccgtccttcttatgtcttaggtggccgggcaatggagatagtatatagtgat
gacaagcttgtgaagtatcttgaaaatgctgttgaggtggacccacaacgccctgtgttg
atagataaatatttatctgatgctgttgagattgatgtggatgcacttgcagactcacat
ggtgatgtggtgattggtggggtaatggagcacattgagcaggctggggtccattcaggt
gactcagcttgcatccttcccacacaaactatctcatcttcctgcttgaacacaattcag
ttatggactacaaagttggcaaagagtctgaatgtttgcggtctcatgaactgccaatac
gcgatcaccatgggtggggatgtttttctgcttgaggcaaatcctcgtgcttctcgtacc
attccatttgtctcaaaggcaattggccatccactagctaaatatgccgctcttgttatg
tccggaaagtcacttaatgagataggtttcacaaaagaggtaatcccagcgcatgttgcc
gtcaaggaagcagttcttccatttgataagttcccaggctgtgatgtgctgttagggcct
gagatgaggagtactggtgaggtaatgggtatagattatctggttgcgattgcatttgcc
aaggctcaaattgctgctgggcagaagctaccactttctggcactgtgttccttagctta
aatgacttgacaaaatcccatctcgaacggctggcaaaggcctttttaggacttggcttc
aggattgtttcgacttctggaacagctcactttcttgaattgaaaggcatctcagtggat
agagtgctgaagatgcacgagggacggccacatgctggtgatattcttgctaatgggcaa
attcaattgatggtgatcactagttctggtgattcacttgatcaaattgatggccggcaa
ttgaggaggatggcacttgcttataaaattcctataataacgacagtttctggtgctttg
gcaacagcaaatgcaattgagaaattaaaaacctgcaaaattgaagtgatggcccttcaa
gacttttttaatgttgagccacagaaagatgatagtaaaagtttgcagccagcatcttct
tctctatga
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