Populus trichocarpa (black cottonwood): 7475380
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Entry
7475380 CDS
T01077
Name
(RefSeq) anaphase-promoting complex subunit 7 isoform X1
KO
K03354
anaphase-promoting complex subunit 7
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
7475380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7475380
03036 Chromosome and associated proteins [BR:
pop03036
]
7475380
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
7475380
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
7475380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_14
TPR_2
TPR_19
TPR_8
TPR_16
TPR_1
TPR_12
TPR_CcmH_CycH
PknG_TPR
TPR_11
ANAPC3
TPR_20
TPR-S
TOM20_plant
TPR_30
Motif
Other DBs
NCBI-GeneID:
7475380
NCBI-ProteinID:
XP_052312256
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All DBs
Position
10:complement(3237595..3246219)
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AA seq
559 aa
AA seq
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MDVPKDQITALLDNQLYNSAQILGCFLVSSSTVSLETSPQLKAENQILLGDALFRDREFR
RAIHTYKQALHYCKIIPKQSSTTSRSSLSNRSSSPNSFNISAINENEVKFKIASCHSAMN
ETRAALVEMEGIPSKARTLQMSLLMAKLYRSSRHTRFAITCYKECLRHCPFVIEAIIALA
ELGVAAKDIISLFLQASNRSGRAPLDHTDSTRWVQRYVEAQCCIASNDYKGGLDLFAELL
QRFPHNIHVLLEIAKVQAIIGKNDEALMNFEKVRSIDPYIVTYMDEYAMLLKTKGDFSKL
NKLVHDLLSIDPTRPEVFVALSVLWEKKDERGALSYAEKSTRIDERHILGYIMKGTLLLS
LKRPEAAVIAFRGAQELRADLRSYQGLVHSYLAFSKIKEALHAAREAMKAMPQSAKALKL
VGDVHASNSGGREKAKKFYESALRLEPGYLGAALALAELHVIEGRNGDAVSLLERYLKDW
ADDSLHVKLAQVFAATNMLQEAMSHYQSALRINPQNEAAKKGLERLEKQMKGVDPDAPEE
DEENEIEDADGDQEETDLL
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgccaaaggatcaaatcactgctcttctcgataaccaactctacaattccgct
caaattctcggttgctttctggtttcatcatctactgttagtctcgaaaccagcccccag
ctcaaagccgaaaatcagattcttcttggagatgcattgtttcgcgatagagagtttcgc
agagcgattcatacgtataagcaagcattgcattactgcaagataattccgaaacagagt
tcgacaacttctaggagttcattgtcgaacaggtcttcttctccgaattcttttaacatt
tcagcaattaatgaaaatgaggtgaagttcaagatcgcatcttgccattcagcaatgaat
gaaactagagccgcacttgttgagatggaaggaattccaagcaaagcaagaactttacaa
atgagtttattgatggcaaagctttatagaagttcaaggcatactcgctttgctatcact
tgttacaaagagtgcttaaggcattgcccttttgtcattgaggctatcatagctttggcg
gaactgggagttgctgccaaggatatcatttcactttttttacaggcttcaaatagaagt
gggcgagctccacttgatcatactgactctactcgctgggttcaacgctatgttgaggcc
cagtgttgtattgcttcaaatgattacaaaggtggtttggatctctttgcagaactcctg
caacgttttcctcataacatacatgtattacttgaaattgcaaaggttcaagccataatt
gggaagaatgatgaggccttaatgaattttgagaaggttcgatcaattgatccatacatt
gtaacttatatggatgagtatgcaatgcttctaaagacaaagggtgatttttcaaagcta
aacaagttggtgcatgatttgctgagtattgatcccacaaggccagaagtttttgtggct
ttgtctgtcctgtgggaaaagaaagatgagagaggagcgctgtcttatgcggagaagagc
accaggattgatgagaggcacattctgggttacattatgaagggtactttgctattgtca
ctaaagcggccagaagcagctgtcattgctttcaggggagctcaagaattgagagctgat
ctccgctcatatcaaggtttggttcattcttatttggcattctccaaaattaaagaggcc
ctgcatgcggccagggaggcaatgaaagccatgcctcagtctgcaaaggctctaaaatta
gtaggggatgtacatgctagtaactctggtggaagagagaaggcaaaaaagttctacgag
tcagcactgaggctggaacctggttaccttggtgcagcattagctttggctgagcttcat
gtcattgagggtcgaaatggagatgctgtgtctctgctagagcgatatctcaaagactgg
gcagatgactctcttcatgtcaagttggctcaagtatttgctgccactaatatgctgcaa
gaggctatgtcacattatcagtctgcattaagaataaacccacagaatgaagctgcaaaa
aaagggctagagcgcttggaaaaacagatgaagggggtggatccggatgcacctgaagaa
gatgaagaaaatgagatagaagatgcagatggagaccaggaagagactgatcttttataa
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