KEGG   Populus trichocarpa (black cottonwood): 7475518
Entry
7475518           CDS       T01077                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9B
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03020  RNA polymerase
pop03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    7475518
  09124 Replication and repair
   03420 Nucleotide excision repair
    7475518
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pop03021]
    7475518
   03400 DNA repair and recombination proteins [BR:pop03400]
    7475518
Transcription machinery [BR:pop03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     7475518
DNA repair and recombination proteins [BR:pop03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      7475518
SSDB
Motif
Pfam: Zn_ribbon_TFIIS
Other DBs
NCBI-GeneID: 7475518
NCBI-ProteinID: XP_024465145
LinkDB
Position
10:15531365..15534275
AA seq 82 aa
MGNMEVAGNNRVYRNEIYHHAAEYTQVLQDVASDPALPRTKSVCCAVCGYGEAVFLQATA
GDEGMTMFYVCCNPNCGHRWRD
NT seq 249 nt   +upstreamnt  +downstreamnt
atgggaaatatggaggttgctggtaataatcgtgtctacagaaatgagatatatcaccat
gctgcagaatacacacaagtgttgcaggatgtggcttcagaccccgctctgcctcggact
aaatctgtttgttgtgctgtatgcggctatggggaagctgtattcttacaggcaaccgcg
ggagatgagggcatgacaatgttttatgtctgctgcaacccaaactgcgggcatcggtgg
agagattga

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