Populus trichocarpa (black cottonwood): 7475555
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Entry
7475555 CDS
T01077
Name
(RefSeq) E3 ubiquitin-protein ligase RHA2A
KO
K16282
E3 ubiquitin-protein ligase RHA2 [EC:
2.3.2.27
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7475555
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
7475555
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
7475555
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_Vps41
zf-RING_5
U-box_ZFPL1
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
7475555
NCBI-ProteinID:
XP_024466461
LinkDB
All DBs
Position
10:13702732..13703738
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AA seq
169 aa
AA seq
DB search
MGLQNQLNDVSSESIPLLLIALIANCVACLRSFLFSVFHSVGLHRLDQAHVMDDGLLGSI
GSGFAGLIVLAEQRKLNRVFSYKYCCGGDSNTNDKGGSDCVVCLCTLRHGDQVRRLDCCH
VFHKECFDGWLDHLNFNCPLCRWPLVSDERVEETRRRVGADVVDWLSLR
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgggtttacaaaaccagctgaacgacgtttcttctgaatcgatcccgttgctcctcata
gcactcatagccaactgtgttgcctgccttcgctctttccttttcagcgttttccactcc
gtgggccttcaccgattagaccaggcccacgttatggatgatgggctgttgggttcgatc
ggctctggcttcgccggcctcatcgtgctcgccgagcagcgtaaactcaaccgggttttt
tcttacaagtattgttgcggtggtgacagtaatacaaatgataagggaggatcggattgt
gtggtgtgcttgtgcacactaagacatggggaccaggtgaggaggcttgattgctgccat
gtttttcacaaggagtgctttgatggatggcttgatcatctcaattttaattgccccctt
tgtcggtggccgcttgtgtccgatgagcgcgtggaagaaacgcgaaggcgcgtgggagcg
gatgtagtggattggctctccttgagatga
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