Populus trichocarpa (black cottonwood): 7475579
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Entry
7475579 CDS
T01077
Name
(RefSeq) cysteine--tRNA ligase 2, cytoplasmic isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
7475579
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pop01007
]
7475579
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pop03016
]
7475579
Enzymes [BR:
pop01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
7475579
Amino acid related enzymes [BR:
pop01007
]
Aminoacyl-tRNA synthetase
Class I (G)
7475579
Transfer RNA biogenesis [BR:
pop03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
7475579
Prokaryotic type
7475579
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
CysS_C
tRNA-synt_1
tRNA-synt_1f
TraK_2
DALR_2
T6SS_VgrG3-like_C
Motif
Other DBs
NCBI-GeneID:
7475579
NCBI-ProteinID:
XP_002315932
UniProt:
B9HWF9
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All DBs
Position
10:complement(14041899..14048574)
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AA seq
532 aa
AA seq
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MANNEELKLYNSMTQQKEVFKSRIPGKVSMYVCGVTSYDFSHLGHARAAVAFDILFRYLQ
HLGYEVTYVRNFTDIDDKIIRRANEIGEDPLSLSSRFCEEYLVDMTDLQCLIPTHQPRVT
DHVEQIKDMITQIIEKDCAYAVEGDVFFAVNKSPNYGQLSGQRLENNRAGERVAVDSRKR
NPADFALWKAAKPGEPSWESPWGPGRPGWHIECSAMSAQYLTFKFDIHGGGIDLIFPHHE
NEIAQSCAACEESSVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA
HYRSPLNYSVSQLESSSDAVFYIYQTLQDCEDALLPFQEGSLKEGAGQNANLVAITADAQ
KCISRLHEDFETKMSDDLNTSPLLTGAFQEALKVVNGSLGMLKKKQQKKQQLSLIRSVTE
VKKEVTEVLRILGLFPPCTCAEVLQQLKGKALKRAGLTEDDVMSLIEDRAVARKSQDFKK
SDQIRTDLSARGIALMDVGKETVWRPCVPVENEEKAKTVVEEPTPPPQAASS
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaacgaagagcttaaactctacaactcgatgacccaacaaaaagaggtattc
aagtcccgtattcccggcaaggtttccatgtacgtttgcggtgtcacctcctatgatttc
agtcacctcggtcacgctcgcgccgctgttgccttcgacatattattcagatacctacaa
cacttgggttatgaagttacttatgtccgcaatttcactgatattgatgacaagataatt
cgtcgggcaaatgagattggcgaagatccattatctttaagtagccgtttttgtgaagaa
tatcttgttgacatgaccgatctgcagtgcctcattccaacccaccagccacgtgtaact
gatcacgtggaacagattaaggacatgataactcagattatagaaaaagactgtgcatat
gcagtggagggagatgtcttctttgccgttaataaatccccaaattatggtcagttatct
gggcagaggttagaaaataatagagcgggggaacgtgttgccgttgactcaaggaaacgt
aaccctgctgactttgcattgtggaaggcagcaaagccaggtgagccaagttgggagagc
ccatggggccctggaaggccaggatggcatatagaatgcagtgcaatgagtgctcagtat
ctgaccttcaaatttgacatccatggcggtgggattgatttgatttttccacatcatgag
aatgagattgcccagagctgtgcagcatgtgaagagagcagcgtgagttactggatgcat
aatggtcatgtcactaataacaatgagaaaatgtcaaaatcattgggtaattttttcaca
attcgccagatcactgaacggtatcatccactggctttgaggcacttcttgataagtgca
cactatcgctctcccctcaattactctgtttcgcagctggaaagctcatcagatgctgtt
ttctacatttatcagacattgcaagattgtgaggatgctttattgccatttcaagaagga
agtctgaaggaaggcgcaggacagaatgccaacctggttgccattactgctgatgcccaa
aaatgcatttctaggctacatgaagattttgagactaaaatgtcagacgatttgaacact
tcgcctttattgactggtgctttccaagaagccttgaaggtcgtaaatggttctttgggc
atgctaaagaagaaacaacaaaagaagcaacaattgtcattgattcggtccgttactgaa
gtcaagaaagaagttacggaagttctgagaattctgggattgtttcctccttgcacttgc
gccgaggttttgcagcagttaaaagggaaggcattgaagagagcaggactaacagaagat
gatgtgatgagcctgattgaggacagagcggtggcaaggaaaagtcaggatttcaagaaa
agtgatcagatcaggactgatttgtctgcaaggggcattgcactgatggatgtgggcaag
gaaacagtttggaggccttgtgttcctgttgagaacgaagagaaggcaaagacagttgtg
gaagagccaacgccgccaccacaagctgcatcaagttga
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