Populus trichocarpa (black cottonwood): 7475669
Help
Entry
7475669 CDS
T01077
Name
(RefSeq) ABC transporter E family member 2
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
7475669
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
7475669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
Fer4
AAA_15
AAA
RsgA_GTPase
Fer4_6
AAA_22
AAA_29
NACHT
AAA_23
Rad17
AAA_16
nSTAND3
Fer4_2
Fer4_9
VapE-like_dom
Fer4_10
TsaE
Fer4_21
SRP54
AAA_5
ORC-CDC6-like
Fer4_4
AAA_24
Fer4_16
Fer4_7
AAA_19
AAA_7
Fer4_8
Fer4_17
Mg_chelatase
AAA_13
Motif
Other DBs
NCBI-GeneID:
7475669
NCBI-ProteinID:
XP_024453668
LinkDB
All DBs
Position
3:5251425..5256501
Genome browser
AA seq
605 aa
AA seq
DB search
MADRLTRIAIVTSDRCKPKKCRQECKKSCPVVKTGKLCIEVTPISKIAFISEELCIGCGI
CVKKCPFEAIQIINLPKDLDKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTAL
KVLAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPRAV
QGNVGQVLDQKDESHRKAELCRDLDLNQVIDRNVGDLSGGELQRFAIAVVAIQNAEIYMF
DEPSSYLDVKQRLKAAQVIRSLLRANSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVT
LPFSVREGINIFLSGFVPTENLRFRDESLTFKVAETPQDNAEEIQTYARYKYPTMSKTQG
NFKLSVVEGEFTDSQIVVMLGENGTGKTTFIRMLAGLLKPDTIEDSESEIPEFNVSYKPQ
KISPKFQHSVRQLLHSKIRDSYMHPQFVSDVMKPLLIEQLMDQEVVNLSGGELQRVALCL
CLGKPADIYLIDEPSAYLDSEQRIVASKVIKRFILHAKKTAFVVEHDFIMATYLADRVIV
YEGQPSVDCTANSPQSLLTGMNLFLSHLDITFRRDPTNFRPRINKLDSTKDREQKTAGSY
YYLDD
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcgattgacgcgtatagccatagtaacctctgatagatgcaagcctaagaag
tgccgtcaagagtgcaagaagagctgccccgttgttaaaactgggaaactgtgtatagag
gtgactcctatttcgaagatagcttttatttcggaggagttgtgcattggatgtggtatc
tgtgtcaagaaatgcccatttgaagcaattcagatcattaacttgcctaaggatttggat
aaagacaccacccatcgttatggccccaatacctttaagttgcacaggctaccagttccg
aggcctgggcaagttcttggcttggttggaacaaacggcattggcaagtccactgctctc
aaagttctagctggaaaactgaaacctaatttgggtcgtttcaataaccctcctgattgg
caggaaattctgacttactttcgaggatctgagcttcagaattactttacccgtatccta
gaggataatttgaaggccatcataaagcctcaatatgttgaccacattccaagagcagtt
caaggcaatgtcgggcaagtgcttgaccaaaaagatgagagccacaggaaggcagaactt
tgtcgtgatcttgatctgaaccaggttatagatcgtaatgtgggggatttatcaggtgga
gagctccaaagatttgctattgctgttgttgcaatacagaatgcagagatatatatgttt
gatgaaccttcaagttatcttgatgtcaagcagaggcttaaagctgcccaagttatccga
tctttgctcagggccaacagctatgttattgtggtggagcatgatcttagtgtcctggac
tatttatctgacttcatttgctgcttgtacgggaaaccgggtgcgtatggagtagtaacc
cttcccttttctgtgagagaaggtatcaatatatttttgtctgggtttgttcctacggaa
aacctacgattccgggatgaatctttaaccttcaaggttgctgagaccccacaggataat
gctgaggagattcaaacatatgcacgatacaaatacccaaccatgagtaaaactcagggc
aatttcaagcttagtgtcgttgagggtgaatttactgactctcagattgtagtaatgctt
ggtgagaatgggacagggaagacaacatttatccgcatgctggctggtttgctgaaacct
gatactatagaagattctgaatctgagatacctgagttcaatgtttcttacaaaccccag
aagataagccccaagtttcaacacagtgtcagacagttactgcattcaaagatacgtgat
tcgtatatgcatcctcagtttgtttcagatgtcatgaaaccacttcttattgagcaactg
atggatcaagaagttgtaaatctatctggtggagagttgcaaagagttgcattatgtcta
tgccttggaaagccagcagacatttatttgatagatgaaccaagtgcgtatcttgattct
gagcagcgtattgttgcttcaaaagtcatcaagaggtttatcctacatgcaaagaagact
gcatttgtggtggagcatgattttataatggcaacatacctggctgatagagttattgtg
tacgagggacagccttctgtggattgtacagcaaattctcctcagtcattgttgactggg
atgaatctcttcttgtctcatctggatatcacatttagacgagaccccactaatttccgg
ccaagaatcaacaaattggactcgaccaaggacagggagcagaaaactgccgggtcatat
tattacctggatgattga
DBGET
integrated database retrieval system
