Populus trichocarpa (black cottonwood): 7475730
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Entry
7475730 CDS
T01077
Name
(RefSeq) U1 small nuclear ribonucleoprotein C
KO
K11095
U1 small nuclear ribonucleoprotein C
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
7475730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pop03041
]
7475730
Spliceosome [BR:
pop03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
7475730
Complex B
7475730
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-U1
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
7475730
NCBI-ProteinID:
XP_002304170
UniProt:
B9GWP7
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All DBs
Position
3:8524876..8527625
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AA seq
202 aa
AA seq
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MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSIIDQRIKEHLGQ
TAAFQQVGAAYNQHLMVQRPRLPVLPTPVMPIGGNNAPLFPGMRPPVLPRPMPGAPGYMN
PPMMPPMMAPPGAPSLPGQMNGIPRPPTMIAQPNVPGSTAAPTPSGPPSMGPPVTYQANQ
AATTSGGFDSFNVNAAAPEANH
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgccccggtattactgtgattattgtgacacttacttgactcatgattctccatctgtt
agaaaacagcacaatgccggttataaacacaaggcaaatgtgaggatctattatcagcag
tttgaggagcagcaaacccaaagtataattgaccaaagaataaaggaacatcttggccaa
actgcagcttttcaacaggttggtgccgcatacaatcagcatctaatggtccagagaccc
cggcttcctgttcttccaactcctgtgatgccaattggaggaaataacgccccattattc
cctgggatgaggcctcctgttttgcctagaccaatgcctggtgctccaggttatatgaac
cctcctatgatgcccccaatgatggcaccccctggtgctccttccttacctggtcaaatg
aatggcattccaaggcctcctacaatgattgcacaaccaaatgttcctgggagtactgca
gcacctactcctagcggtcccccgtctatgggtccacctgttacttaccaagcaaatcaa
gcagcaacaaccagtggaggctttgacagcttcaatgtgaatgccgcagcccctgaagcc
aatcattag
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