Populus trichocarpa (black cottonwood): 7475776
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Entry
7475776 CDS
T01077
Name
(RefSeq) agamous-like MADS-box protein AGL11
KO
K09264
MADS-box transcription factor, plant
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7475776
Transcription factors [BR:
pop03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
7475776
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GFIT
Motif
Pfam:
K-box
SRF-TF
RNase_P_Rpp14
VPS51_Exo84_N
SPG4
Motif
Other DBs
NCBI-GeneID:
7475776
NCBI-ProteinID:
XP_052305399
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Position
19:11809129..11814889
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AA seq
202 aa
AA seq
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MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN
NSIRSTIDRYKKASSDSSNASSITEINAQYYQQESAKLRQQIQMLQNSNRHLMGDAVSNL
SVKELKQLENRLERGITRIRSKKHELLLAEIEYLQKREIELENESVCLRTKVMKNTKFSY
VSNVDEALLDISISLTNITPRI
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaggaaagatcgagatcaagaggatcgagaacaccaccaatcgtcaggttact
ttctgcaagaggagaaatgggctcttgaagaaagcttatgaattatcagttctatgtgat
gctgaagttgctctcatcgtcttctctagccgtggccgtctctatgagtacgccaacaac
aacagcataagatcaaccatagataggtacaaaaaggccagttcagatagttcaaatgca
tcctctatcacagaaatcaatgcccagtattatcaacaagaatcagcaaagctgcggcaa
caaattcaaatgctacagaattctaacaggcacttaatgggcgatgctgtaagtaattta
tctgtgaaagagcttaagcagctggagaataggcttgagagaggcattactagaatcagg
tcaaagaagcatgagttgctgctagctgaaattgagtacttgcagaaaagggagattgag
ctggaaaatgaaagtgtttgtcttaggaccaaggtaatgaagaacaccaaattctcttac
gtatcaaatgttgatgaggctcttcttgatatttccatatccttaacaaatataacacca
cgcatttga
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