Populus trichocarpa (black cottonwood): 7475788
Help
Entry
7475788 CDS
T01077
Name
(RefSeq) transcription factor IIIA
KO
K09191
general transcription factor IIIA
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7475788
03021 Transcription machinery [BR:
pop03021
]
7475788
Transcription factors [BR:
pop03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
7475788
Transcription machinery [BR:
pop03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
7475788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
DUF7565
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
7475788
NCBI-ProteinID:
XP_024446707
LinkDB
All DBs
Position
19:12146503..12149222
Genome browser
AA seq
378 aa
AA seq
DB search
MVMMEEEAAEKGRAVIFRDIRRYYCDYCGICRSKKSLITSHVLTHHKEEIEKERVGGDEV
KEGVRSNTCEKCGASFKKPAYLVQHMQSHSLERPFMCSVDDCHASYRRKDHLTRHLLHHE
GKLFKCEIENCDRKFVYLSNLKRHVRELHDESSSSSSVGGEKQYVCQELGCGKAFRYPSK
LQKHEDSHINLDSMEAMCIEPGCMKHFSNKKCLKAHIQSCHQYINCDICGTKQLRKNIKR
HLCTHEPVNGSTERIKCHFKGCQHAFSTKTNLNQHVKAVHLEQRPYVCGFPGCDMRFSYK
HVRDKHEKSGLHVYTPGDFVESDQQFRSRPRGGRKRKFPTVEMLIRKRVTPPTEFDECHT
LLHEMEAEDPVVSHALPT
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggtgatgatggaagaagaagcagcggagaaaggaagggcagttatattcagagatata
aggcgatattactgtgattactgtggaatttgcagatccaagaagtctcttatcacttct
catgtcctcacccatcacaaggaggagatagaaaaagaacgagttggtggggatgaggta
aaggagggagtaagatccaatacttgcgaaaaatgtggtgctagtttcaaaaagcctgcg
tatttggttcaacacatgcaaagtcattctcttgagaggccatttatgtgttcagttgat
gattgtcatgccagctatagaaggaaagatcacttaactcgccaccttctccaccacgaa
gggaaacttttcaagtgtgaaattgagaattgtgatcgtaaatttgtttacctaagcaat
ttgaaaaggcatgttagagagcttcatgatgagagttcttcctccagtagtgttggaggt
gagaagcagtatgtatgccaggaactgggatgtggaaaggcattcagatacccgtcaaag
ctgcaaaagcatgaggattctcatattaacctggactcaatggaggcaatgtgtatagaa
ccaggctgtatgaaacatttttctaataaaaaatgcctcaaggcccacatacagtcctgc
caccaatacattaactgtgatatttgtggcacgaaacagctgagaaagaacattaagaga
catctttgcacccatgaacctgtcaatggttcaacagagagaatcaaatgccatttcaag
ggttgtcagcacgcattctctactaaaacaaatcttaaccagcatgtgaaggcagtgcac
cttgaacaaaggccttatgtttgtggatttccaggttgtgacatgagattctcatacaag
catgtgagagataaacatgaaaaatctggtttgcatgtctatactcctggtgattttgtg
gagtctgatcagcagttcaggtcaaggccaagaggtgggaggaagaggaaattccccact
gtggaaatgttgatacgcaagagagtaactccaccaactgagtttgatgagtgccacacg
ttgttgcatgaaatggaggctgaggacccagtagtgagccatgccctacctacctag
DBGET
integrated database retrieval system
