Populus trichocarpa (black cottonwood): 7475964
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Entry
7475964 CDS
T01077
Name
(RefSeq) probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03015
mRNA surveillance pathway
pop04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
7475964
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
7475964
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pop01009
]
7475964
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7475964
03036 Chromosome and associated proteins [BR:
pop03036
]
7475964
Protein phosphatases and associated proteins [BR:
pop01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
7475964
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
7475964
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
7475964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_5
EF-hand_8
EF-hand_13
IGFBP
Motif
Other DBs
NCBI-GeneID:
7475964
NCBI-ProteinID:
XP_024467176
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All DBs
Position
10:complement(3268731..3274414)
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AA seq
476 aa
AA seq
DB search
MYSGSSDGESHEAAQRRIPPASSMLWVRNLRRFIGSGAGLGSEALMELETKRILLDIFKE
KQQKSAEGGTIPSFYKKKPEEGSISHRVQRLAKYRFLKKQSDLLLNADDLDAMWVCLREN
CVIDDATGAEKMNYEDFCHIASVCTEQIGPKCRRFFSPSNFMKFEKDESGRIAILPFYLY
VMRTVSLTQARIDMSELDEDSDGFLQPHEMEAYIRGLIPNLAQLQDMPAAFIQMYCRIAA
HKFFFFCDPHRRGKACIKKVLLSNCLQELMELHQESEEEVTDSEQAENWFSLTSAQRICD
MFLALDKDMNGTLSKQELGEYADGTLTGIFIERVYDEHVRRGKGGGGNTREMDFESFLDF
VLALENKDTPEGLTYLFRCLDLSGRGFLITPDIHSLFRDVHQKWIEGGNYELCIEDVRDE
IWDMVKPADPLRITLADLLACKQGGTVASMLIDVRGFWAHDNRENLLQEEEEPEEE
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtacagtgggtctagcgatggcgagagccacgaggcagctcagaggagaatcccgccg
gcttcgtcaatgctttgggtccgtaacctccgccggttcatcggatccggtgccgggctc
ggatctgaagctcttatggagcttgagacgaagagaatattgctagatattttcaaagag
aagcaacaaaagagtgctgaaggtggcacaataccaagtttctacaagaagaaacctgaa
gaaggatcaataagtcatagagtccagaggctggcaaaatatcggtttttgaagaaacaa
tcagatcttttacttaatgcggatgatctcgatgcaatgtgggtttgcttgagagaaaat
tgtgtgattgatgatgccactggtgcagaaaagatgaattatgaagatttttgtcacata
gcttcggtatgtacagagcaaataggccccaaatgccggcgctttttcagcccatctaat
ttcatgaagtttgaaaaggatgaatctggaagaattgctattttaccattttacctttat
gtgatgcgcactgtttctcttacacaggccagaatcgatatgagtgagcttgacgaggat
tctgatggatttcttcagcctcatgaaatggaggcttacatacgaggtcttatccctaat
ttagcacaactacaggatatgcctgctgcatttattcaaatgtattgtcgcatagctgct
cacaaattcttcttcttttgtgatcctcataggcgagggaaagcctgcataaagaaggtg
cttcttagcaactgtctccaggaattaatggaattgcaccaggaaagtgaggaggaagtc
actgacagtgagcaagctgaaaattggttttctttgacatccgcacaacgcatatgtgat
atgttccttgcccttgataaagatatgaatggaacactgagcaagcaagaacttggagaa
tatgcagatggtacgctgacaggaatctttattgagagagtgtatgatgagcatgtccgc
cgtggaaaaggtggtggagggaatactcgggagatggactttgaaagttttcttgacttt
gttttggcattagaaaacaaagacactcctgaagggttgacatatttatttcgttgtctt
gatcttagtggacggggatttctcatcactcctgatattcactcacttttcagagatgta
caccagaaatggatcgagggcggtaactatgaattgtgcattgaggatgtgagggatgaa
atatgggacatggtcaagccagctgacccattgaggattacactcgctgatctgctagct
tgcaaacaaggagggactgtagccagcatgcttatagatgtgcgtggtttttgggcacat
gataatagagaaaatcttctccaggaagaggaagaaccagaagaagagtga
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