Populus trichocarpa (black cottonwood): 7476254
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Entry
7476254 CDS
T01077
Name
(RefSeq) syntaxin-32
KO
K08490
syntaxin 5
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
7476254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7476254
Membrane trafficking [BR:
pop04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
7476254
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Ortholog
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GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
HEAT_SCC3-SA
Motif
Other DBs
NCBI-GeneID:
7476254
NCBI-ProteinID:
XP_024445500
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Position
18:complement(9167211..9171559)
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AA seq
338 aa
AA seq
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MMMPPVKTSYRDRTQEFLSVAERLKKSFSSANNVASSSSGSSTKADATRSAVAIQSEFNK
RASKIGLGIHQTSQKLAKLAKLAKRTSVFDDPTLEIQELTAVIKQDITVLNSAVVDLQLL
CSSQNESGNISSDTTTHSTTVVDNLKNRLMTATKEFKEVLTMRTENLKVHDNRRQLFSST
ASKDSSNPFVRQRPLASRTAANASQAPPPPWANGSVSSSQLFTSKQTDVESQPLLQQQQQ
MVPLQDSYMQSRAEALRNVESTIHELSNIFTQLATMVSQQGELAIRIDENMEETLSNVEG
AQGQLVRYLNSISSNRWLMMKIFLVLVVFLMFFVFFVA
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgccgccggtaaaaacatcgtatagggatcggacacaagagtttttgagtgta
gcagagaggttaaagaaatcgttctcatcggcgaacaatgtggcatcttccagcagtggt
agcagcaccaaggccgatgccacgcgatctgctgtggcgattcaatccgaatttaataaa
agagcatccaagattgggcttgggatccaccagacatcgcaaaagctggcaaagctcgca
aaactggcaaaaagaacatcggtgtttgatgatccaactctggagatccaagagttgaca
gcagtaataaaacaagatattactgtgcttaattcagctgtagtagacctccaactcctt
tgcagctcccagaatgaaagtggaaacatctcaagtgatactacaactcattcaaccaca
gttgtggataacctaaagaatcgcttgatgactgctacaaaggagtttaaagaagtcctc
acaatgcggacagagaatctaaaggttcatgacaatcgaaggcagttgttttcttccact
gcttcaaaagactcctcaaatccctttgttcgccagcgtccacttgcttccaggacagct
gctaatgcatcacaggctcctccccctccatgggccaatggttctgtatcctcatcccag
ttatttaccagcaagcagacagatgtagagtcccagccacttttgcagcagcagcaacaa
atggttccactacaagacagttacatgcagagcagagctgaagcacttcgtaatgtggag
tcaacaatccatgagctgagcaacatctttactcaactagctactatggtttcacagcaa
ggagagcttgcaataaggattgacgagaacatggaggagacactgtcaaatgtagaaggt
gcgcagggccaactagtcaggtatcttaacagtatttcatccaaccgatggctgatgatg
aaaatattccttgtacttgttgtattcctcatgttttttgtgttttttgtggcgtaa
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