Populus trichocarpa (black cottonwood): 7476280
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Entry
7476280 CDS
T01077
Name
(RefSeq) heat stress transcription factor C-1
KO
K09419
heat shock transcription factor, other eukaryote
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7476280
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
7476280
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSF_DNA-bind
SPC25_N
Fungal_TACC
PEP-utilisers_N
DUF5320
NUDE_C
APG6_N
Motif
Other DBs
NCBI-GeneID:
7476280
NCBI-ProteinID:
XP_002324418
UniProt:
A0ACC0RN43
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Position
18:9819436..9820857
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AA seq
339 aa
AA seq
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MMEANNNNNIVAPFVLKIYQMVSDPTTDSLISWGRANNSFIVIDPLDFSQRILPVYFKHN
NFSSFVRQLNTYGFRKVDPDRWEFANEWFLRGQKQLLKNIVRRKHSSNNKGSSYMQVNIK
GEDFDDEDIIMEIARLKQEQKALEQELEGMNKRLEATERRPQQMMAFIYKVVEDPDLLPR
MILEKERTRQIKDKKQRLMISSSATSPSGMAISSTSTIIKSEVVHEEGSIGVISSPETVF
NVDKFCQSSPSPDESDINAIGWLDQVNYGLAVAGPSPFTTGSMGAGIGATVAVLPQGNST
VIGYGGDWGDHINYFGEMAAGVEDRPRPSYPFSLLGGGF
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggctaataacaacaataacatcgtagcaccctttgttttgaagatttatcag
atggtcagtgatccaacaacggattctctaatttcctggggcagagcaaacaacagtttc
atcgtcatcgaccctttagatttctctcagaggattttgcctgtttacttcaaacacaac
aacttctctagctttgttcgacagttgaacacctatggttttagaaaagtcgatccagat
agatgggaatttgcaaacgaatggtttcttagagggcaaaagcaattgctgaagaatata
gttcgcaggaagcatagttctaataataaagggtcatcatatatgcaagtaaatataaaa
ggtgaagacttcgatgatgaagatataattatggagatagcaaggttaaagcaagaacag
aaggccttagagcaagaacttgaaggcatgaacaagcgtttagaggcgacggaaagacgt
ccacaacaaatgatggcttttatctataaagttgttgaagacccggatctccttcctcgt
atgattcttgaaaaggaacgtacaaggcagataaaagacaagaaacaacgtttgatgata
tcttcttcggcgacatcaccttctggcatggcaatttcaagtacttcaacaataataaag
tctgaagtggttcatgaagagggttctataggggtaatatcttcaccagaaactgttttt
aatgtagataaattttgtcaatcttcaccctcacctgatgagtcagatattaacgctata
ggatggttagatcaagtaaactatggtcttgccgtggcaggacctagtccatttacaaca
ggctcaatgggtgcagggattggggcaacggtggcagtgttgccgcaagggaatagtact
gtgataggatatggtggtgattggggtgaccacataaactattttggagaaatggcggcg
ggagtggaggataggccacgaccgtcttatccattttcacttttgggaggtggcttttag
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integrated database retrieval system
