Populus trichocarpa (black cottonwood): 7476312
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Entry
7476312 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7476312
KO
K20523
SH3 domain-containing YSC84-like protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7476312
Membrane trafficking [BR:
pop04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
7476312
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ysc84
FYVE
Motif
Other DBs
NCBI-GeneID:
7476312
NCBI-ProteinID:
XP_024455046
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All DBs
Position
4:complement(5284269..5287952)
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AA seq
513 aa
AA seq
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MEGSPVNSENTHNLDSRVSDFHRPTNSPPSDNGKIGSQKMIRPEESDTGLFEEGNDEKRE
ETKITHQKLGNYFYYDSPHYEETGVWIPVSVPPMIESNREEWTARGGFHSNGGYFPEGDM
GWSQYIGEDKELTMWDVIVEMLLAARGKVNAIASGDLQGCGISWLSSHLLEQAWQEMAQT
LTEANFGNVSEILEQDPPKWLPDSTAAACMLCGVRFHPIMCSRHHCRFCGGIFCGDCSRG
RSLLPVKFRVTDPQRVCDVCCVRLESVQTYLMDQVSNAAQLPTHDLTDLSTLRSWVNFPW
GQTMEYEIYKAANTIQGYHKVGYLKPEKSIPDAILRRAKGLAIITIVKVGVMVTYNIGTG
LVIARREDGSWSPPSAISTLGLGWGAQAGGELTDFIIVLRTTEAVKTFCGNAHLSFGAGV
SAAVGIAGRAFEADLRAGDGGYAACYTYSCSKGAFVGCSLEGSVVTTRSKENSRFYGSQS
LSASDILLGSLPRPPAAAILYRALADLYQKFER
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggagggcagccctgtaaactccgaaaatacccacaacctggattctagggtttctgat
ttccatcgtcccaccaattctcctccatcggataatgggaaaattgggagccagaaaatg
attagacctgaagaaagtgatactgggttatttgaggaggggaatgatgagaagagagaa
gaaacaaaaattacccatcaaaagctagggaattacttttattatgactcgcctcattat
gaagaaactggggtttggattcctgtttctgttccgcccatgatagaaagtaatcgtgaa
gagtggacggctagaggtggttttcactccaatggtggttattttcctgaaggtgatatg
gggtggagtcagtatattggagaagacaaggaattgactatgtgggatgtgattgtagaa
atgttacttgcagctcgtggaaaagtgaatgcaattgcttctggtgatttacaggggtgt
ggcatttcgtggttatccagccatttacttgagcaagcttggcaagagatggcccaaact
ctcaccgaggctaattttggtaacgtgagtgaaattcttgaacaggaccctcctaaatgg
ttgcctgatagcactgctgctgcttgtatgctttgtggtgtgcggtttcatccgattatg
tgctccaggcatcactgtaggttctgtggaggaatattttgtggtgactgctctagagga
aggagtttgttgccagtaaagtttcgtgtcacagatccccagcgagtctgtgatgtatgt
tgtgtgcgactcgagtctgtccagacatatttgatggaccaagtaagcaatgctgcccag
ctaccaacccatgacctgacagacctcagcactttgagatcgtgggttaactttccatgg
ggacagaccatggaatatgaaatttataaggcagcaaacacaattcaaggctatcataag
gtaggttatttgaaacccgagaagtcaattccagatgccattctacgacgagcaaaaggc
cttgcaattattacaattgttaaagttggggtgatggtcacatataatattggaacagga
cttgtaattgctcgcagagaagatggttcatggtccccaccttctgccatatctacactt
ggtttgggatggggagctcaggctggaggtgaattgaccgatttcataattgtgttgaga
actactgaagcagtcaagacattttgtggtaatgcgcatttgtcattcggtgctggtgtg
agtgcagcagttggcatcgctggacgggcatttgaagcagatttacgagctggtgatggt
ggatatgctgcttgttatacatacagctgcagtaaaggagcatttgttggatgttcactt
gaagggagtgttgtcactacccgctcaaaagagaattccagattctatgggagccagtct
ttatctgcatcagatatactacttggctcgttgcccagaccacctgccgccgcaattctg
tatcgtgctcttgcagacctatatcagaagttcgagaggtga
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