Populus trichocarpa (black cottonwood): 7476313
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Entry
7476313 CDS
T01077
Name
(RefSeq) heat stress transcription factor A-4c isoform X1
KO
K09419
heat shock transcription factor, other eukaryote
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7476313
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
7476313
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Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
APG6_N
Suppressor_APC
Pro_dh
Nup88
TMF_TATA_bd
AAA_23
Motif
Other DBs
NCBI-GeneID:
7476313
NCBI-ProteinID:
XP_002305052
UniProt:
B9H2D8
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Position
4:complement(5267785..5269970)
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AA seq
407 aa
AA seq
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MDESQGSPNSLPPFLAKTYEMVDDPSTDPIVSWSQSNKSFTVWDPPEFARDLLPRFFKHN
NFSSFIRQLNTYGFRKIDPEQWEFANEDFIRGQPFLMKNIHRRKPVHSHSLQNLQGQGSN
LLTDSERQSMKDDIERLKRDKEALILELQMQEQERKGFEMQIEGLKEKLQQMERRQQTMV
SFVTRVMPKPGLALNLMPQLEGHDRKRRLPRIGCLHSEASSNEDNQTVTSQALSRENADG
NSFALLNMEQFDQLESSLTFWENMVNDVVQTHSHNTKTIEMDESTSGAESPAISCAQLIF
DFRPKTPGIDMNSEPSIAVVPEPVSPKEQPAGTAPAVATGVNDVFWEQFLTENPGSTDTQ
EVQSERKDSDGRKNEIKPGDPRKFWWDMRNVNNLTEQMGHLTPAERT
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatcacagggcagtccgaactcgctgccgccttttcttgcaaagacgtatgag
atggtggatgatccttcgacggatccaattgtttcttggagtcagagcaataagagtttt
accgtatgggatccaccggagtttgccagggatttgctgcccagattttttaagcataat
aatttctctagcttcatcagacagctcaatacttatggttttaggaaaattgatcccgag
caatgggaatttgctaatgaagattttataagaggtcaaccatttctaatgaagaacatc
catagacggaagccagttcatagccattcgttgcagaatcttcaaggacaaggctctaat
ctgctgactgattcagaaagacagagtatgaaggatgatatagagaggcttaaacgtgat
aaagaagcacttattttggagttacaaatgcaggaacaagagcggaaaggatttgagatg
caaattgagggtttgaaagagaagttgcaacaaatggaacgaagacaacaaactatggta
tcttttgtgacccgagtgatgcctaaaccaggtcttgccttaaatctaatgccgcagttg
gaaggtcatgatagaaagagaaggctgccgagaattggttgtctacacagtgaagccagt
agtaatgaggataatcagacggtgacttcccaagctctgtctagagaaaatgcagatggt
aattcttttgccctgttaaacatggagcagtttgatcagttggaatcatccctgacattc
tgggagaatatggtaaatgatgttgttcaaacccacagtcataacactaaaacgatagag
atggatgagtctacaagtggtgcagaaagtccagctatatcttgtgcacagctcattttt
gattttcgccctaaaacacctggtattgacatgaattctgaaccttctatagctgttgtg
ccagagcctgtttcaccgaaggaacaacctgctgggactgctcccgctgtggcaactgga
gtcaacgatgtattctgggaacagtttttaactgagaatcctggttcaactgacacacag
gaagttcaatctgaaagaaaggattctgatggtagaaaaaatgaaataaaacctggtgat
cccagaaaattttggtgggatatgaggaatgtaaataatcttacagagcagatggggcat
cttactcctgctgaaagaacttga
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