KEGG   Populus trichocarpa (black cottonwood): 7476322
Entry
7476322           CDS       T01077                                 
Name
(RefSeq) ras-related protein RABA1d
  KO
K07904  Ras-related protein Rab-11A
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pop00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    7476322
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pop04131]
    7476322
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pop04147]
    7476322
   04031 GTP-binding proteins [BR:pop04031]
    7476322
Membrane trafficking [BR:pop04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab GTPases
    7476322
Exosome [BR:pop04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   7476322
  Exosomal proteins of colorectal cancer cells
   7476322
GTP-binding proteins [BR:pop04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab11/25 [OT]
    7476322
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU RsgA_GTPase AAA_22 Gtr1_RagA AAA_16 ABC_tran KAP_NTPase AAA_14 AAA_24 AAA_5 TniB PduV-EutP AAA_21
Other DBs
NCBI-GeneID: 7476322
NCBI-ProteinID: XP_002305729
UniProt: B9H2F2
LinkDB
Position
4:5084467..5088920
AA seq 218 aa
MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDSK
VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV
VMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLNQIYSIVSK
KAMETGDNAAASAVPSKGEKIDVNKDVSAMKRVGCCSS
NT seq 657 nt   +upstreamnt  +downstreamnt
atggcagggtacagagccgaagatgactatgattacctgttcaaggttgtacttattggc
gactcaggtgtgggcaagtccaatcttctttcaagattcactcgtaatgagttcagtttg
gagtcgaagtctactattggtgttgagttcgctactcgcagcttgaatgttgattccaag
gtcattaaggcccagatttgggacactgctggccaagaaaggtaccgtgccataactagt
gcttattaccggggagcagtgggtgcattgcttgtgtatgatgttacccggcactcaaca
tttgaaaatgttgaaaggtggctaagggagttgagggatcatacagatcctaacattgtt
gtcatgctcatcggcaataaatcagatcttcgccacctggtggctgtctcaactgaggat
ggaaaatcctttgccgagagggagtccctctacttcatggaaacatctgctttggaagct
actaatgttgacaatgcatttgctgaagttcttaatcagatctatagtattgtgagcaag
aaagctatggagacaggtgacaatgcagcagcttcagctgttccatccaaaggtgagaaa
atcgatgtcaataaagatgtttccgctatgaagagggtggggtgctgttcaagctag

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