Populus trichocarpa (black cottonwood): 7476368
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Entry
7476368 CDS
T01077
Name
(RefSeq) syntaxin-61
KO
K08500
syntaxin of plants SYP6
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
7476368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7476368
Membrane trafficking [BR:
pop04131
]
SNARE
SNAP-25[C] (Qc)
STX6
7476368
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Gene cluster
GFIT
Motif
Pfam:
STX6_10_61_N
SNARE
MCU
T2SSF
Motif
Other DBs
NCBI-GeneID:
7476368
NCBI-ProteinID:
XP_002305773
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All DBs
Position
4:4109701..4112689
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AA seq
246 aa
AA seq
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MSSAQDPFYIVKEEIQESIDKLQSSFHQWERISSDSGEQVRLTKELLAACESIEWQVDEL
DKAISVAARDPSWYGIDEAELEKRRRWTSTARTQVGNVKKAVVAGKELNLSGTASVNGMR
RELMRMPDAQQTDKSNQYTQDNDDFIQSESDRQMLLIKQQDDELDELSASVERIGGVGLT
IHEELLAQERIIGDLDTEMDTTSNRLDFVQKKVAMVMKKASAKGQLMMIVFLVVLFIILF
VLVFLT
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcagcacaagacccgttttatattgtgaaagaggagattcaagaatctattgac
aagttgcaatcttcatttcaccaatgggaacggatttcttctgactcgggagagcaagtg
cgtcttacaaaggagctgcttgctgcttgtgagagcattgagtggcaggtggatgaattg
gacaaagcaatttctgtagcagctagagacccttcttggtatggcattgatgaagcagaa
cttgaaaaacggaggagatggaccagcactgctcgcactcaggtgggcaatgtgaagaaa
gcagtagtagctggaaaagagttgaatctcagtggaactgctagtgtgaatgggatgcgc
agagaattaatgaggatgcctgatgcacaacagactgacaaatccaatcagtacactcaa
gataacgatgattttatacaatcagaatcagatagacaaatgcttcttataaagcaacag
gatgacgagttggatgagcttagtgcaagtgtggagagaattggaggtgttggcctaacc
atacacgaagaactacttgcacaggaaaggatcataggtgatttggatacggaaatggac
actacatcaaatcgacttgattttgttcagaaaaaagtggctatggtcatgaagaaggcc
agcgcaaaggggcaacttatgatgatagtgttcttggtagttttgttcatcatcctattt
gttctggtcttcttgacctaa
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