Populus trichocarpa (black cottonwood): 7476399
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Entry
7476399 CDS
T01077
Name
(RefSeq) probable beta-1,4-xylosyltransferase IRX14H
KO
K20871
putative beta-1,4-xylosyltransferase IRX14 [EC:2.4.2.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pop01003
]
7476399
Glycosyltransferases [BR:
pop01003
]
Polysaccharide
Structural polysaccharide
7476399
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_43
Motif
Other DBs
NCBI-GeneID:
7476399
NCBI-ProteinID:
XP_002306485
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Position
5:11334807..11339230
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AA seq
504 aa
AA seq
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MKLSMLQQSYMNRRSASFRGSSAPLDSSTDNTIKSPAAIFWLLLHGFCCLISLVLGFRFS
RLVFFFLFSTSTTTTLYIATPLPHLTKTNNNINDLPLEIPVINKTLSSSSRVVVGRHGIR
IRPWPHPNPSEVMKAHQIIETVQREQRTQFGVKSPRTLIVVTPTYVRTFQTLHLTGVMHS
LMLVPYDVVWIVVEAGGATNETASIIAKSSIKTFHIGFTQKMPNSWEGRHKLETKMRLRA
LRVVREEMMDGIVMFADDSNMHSMELFDEIQNVKWFGAVSVGILAHSGGGGGESSSAVAE
KDVKPNLSNPAMPVQGPACNASNKLVGWHTFNSLPYEGKSAVYIDDRATVLPRKLEWAGF
VLNSRLLLKEAQDKPEWVKDLDLVDENIESPLALLKDPSMVEPLGSCGRQVLLWWLRVEA
RADSKFPPGWIIDPPLEITVPSKRTPWPDAPPELPSNKKLTINQEQTIKRSPKTRSPRSK
RRSKRKHEAKLVETQVSTRHSEQN
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgaaactctccatgctacagcagagctacatgaaccgccgaagcgcaagttttagagga
tcatcagcacccttagattcatccacagacaacacaatcaaatcaccagccgcgatcttt
tggctccttctacatggcttctgctgtctcatcagtcttgtcctcggctttcgcttctct
cgtctcgttttcttcttcctcttctccacctccaccactacaactctctacatagcgaca
ccgctcccccatctcaccaaaacgaataataacatcaatgatctcccccttgaaatcccg
gttatcaacaaaacgctgagttcgagttccagagttgtggtcgggcgtcacgggatccgg
atccggccatggccgcacccgaacccgagtgaagtaatgaaggcgcatcagataatagag
actgttcagagagagcaaaggactcaattcggtgtgaagagtcctaggacccttattgta
gtcacgcccacttatgtacggactttccaaactttacatttgactggcgttatgcattct
ctgatgttggtcccctacgacgtcgtctggatcgtggtggaggccggtggtgccaccaat
gaaactgcttccattatcgccaaatcgagtatcaagacttttcatattggatttactcag
aaaatgccgaattcttgggaaggaaggcacaaattggagactaaaatgcgacttcgagct
ttgagagttgtgagagaggagatgatggatggaatagtgatgtttgcggatgatagtaac
atgcatagtatggaactatttgatgagatacaaaatgtgaaatggtttggtgcggtttcg
gttgggattctggctcattctggtggtggtggtggtgagtcgtcttcagctgtggctgag
aaggatgtgaaaccgaatttgtctaatccagcaatgcctgttcagggaccagcttgtaat
gcttctaacaaattggttggttggcatacgtttaattcattgccgtatgaggggaagagt
gccgtttatatcgatgatagagctacagtgttgcctagaaagcttgagtgggctgggttt
gtgttgaattcaaggttgcttttgaaggaagctcaggataagcctgaatgggttaaggat
cttgatttggttgatgagaatatagagagtcctttagctttgctgaaggatccttctatg
gtagagccacttgggagctgtgggcgacaagttttgctgtggtggcttcgtgttgaagct
cgtgctgatagcaaattccctccaggatggataattgacccaccgttggaaattactgtg
ccatcaaaacgaacaccatggccagatgctcctcctgaactcccttccaacaaaaagtta
acaattaaccaagagcagactattaagcgttctccaaagactcgatcaccccgatcaaaa
cgcagaagtaagagaaagcatgaagcaaagttggtggagacacaggtttctacaaggcat
tctgaacaaaattga
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