Populus trichocarpa (black cottonwood): 7476432
Help
Entry
7476432 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7476432 isoform X2
KO
K13091
RNA-binding protein 23/39
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pop03041
]
7476432
Spliceosome [BR:
pop03041
]
Common components
Common spliceosomal components
General mRNP proteins
7476432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
7476432
NCBI-ProteinID:
XP_002306512
UniProt:
B9H6Q0
LinkDB
All DBs
Position
5:12401658..12411296
Genome browser
AA seq
550 aa
AA seq
DB search
MEFDEIEYLEKTVEEAEDRDDSKKRNSSSSQKRDGTERSYRKREVDDEDVDNDENRKVKK
SKAEDEKGRDHHRRDRDLDRDRDRSSREKDRDRERSGHREKEKERERREKEKERERIERE
REEERDRRERSRSRSRRHESDSREREREKEIDTRESRRFKDKKEGVEPEADPERDQRTVF
VYQMPLKVTERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQ
LLFGQPVMVKPSEAEKNLVQSSASSGGTSGVAGPFGPVDRKLYVGNLHFNMTEMQLRQLF
EPFGTVELVQLPLDLETGQCKGFGFVQFTQLENAKAAQSALNGKLEIAGRTIKVSSVTEH
GGQQDTGAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVPLLNGSASNQ
QAMSLPIIGQTAIGAAALPAPVLSSPAYEPIGQPSECLMLKNMFDPATETEPDFDLDIKE
DVEEECSKYGQVEHIFVDKNSTGCVYLRFGSIEAAAGAQRAMHMRWFARRLILAVFMPTR
EYEARFQIGA
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggaattcgacgagatcgagtatctggagaaaaccgtagaggaagcggaagatcgagac
gattcgaagaagaggaacagcagcagcagccaaaagagagatggaaccgagagaagttac
aggaagcgagaggtcgatgatgaggatgtcgacaacgatgagaaccgaaaggtgaagaaa
tcgaaagctgaggacgagaaaggtcgcgatcaccaccggagagaccgagatttagataga
gatagagatagaagtagtagagagaaggatagagacagagagagaagtggccatagggag
aaagagaaggagagagagaggagagagaaagagaaggagagggaaaggatagagagggag
agagaggaggagagagaccggagagagcgaagcaggagccggtcaaggaggcatgaaagc
gattctcgcgagagggaaagagagaaagagattgatacaagagaaagcaggagatttaaa
gataagaaagaaggtgtggagcctgaagcagatccagaaagggaccaacgaactgttttt
gtgtaccagatgcctttaaaagtgacagagagagatgtttatgaattcttctcaaaagcg
ggcaaggtgagggatgttcgattgataatggatagaaattcaaggcggtcaaaaggagtt
gggtatgttgaattctatgatgcaatgtctgtgccgatggcaatagctctttcaggtcaa
ctcctttttgggcaacctgtaatggtcaagccttctgaggctgaaaagaatctggttcag
tctagtgcttctagtgggggcacaagtggtgttgctgggccatttggacctgttgacaga
aaactatatgttggaaatttgcattttaacatgaccgaaatgcagcttagacagcttttt
gaaccattcggtactgtggagcttgtacaactgcctcttgaccttgagacaggacaatgc
aaaggtttcggatttgttcaattcactcaacttgaaaatgcaaaggctgcacaaagtgct
ttgaatggaaaattggagattgctggtcgaacaattaaggtttcatctgttacagaacat
ggtgggcagcaagatactggagcaaaatctgcagacttcgatgatgacgatggtggtgga
ttggccttgaatgctcaatcaagagcattgcttatgcagaagctggatcgcactggtatt
gctacaagtattgcaggctctctcggagtacctttgctaaatggttcagcttcgaatcaa
caagccatgagcttgccgataattgggcaaactgctattggagcagcagcacttccagca
ccagttttatcttcccctgcctatgaacctattgggcaacccagcgagtgtctaatgtta
aagaatatgtttgatccagccactgagacagaaccagattttgatttggacattaaagag
gatgtagaagaagaatgttcaaagtatggtcaggtggaacatatttttgtggacaagaat
agtactggttgtgtttatctacggtttggcagcatcgaagcagccgctggagctcagcgt
gcaatgcatatgaggtggtttgcacgcaggttaattttagcagttttcatgccgacccgt
gaatatgaagcaagatttcaaattggagcttga
DBGET
integrated database retrieval system
