Populus trichocarpa (black cottonwood): 7476660
Help
Entry
7476660 CDS
T01077
Name
(RefSeq) pectinesterase
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00040
Pentose and glucuronate interconversions
pop01100
Metabolic pathways
Module
pop_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
7476660
Enzymes [BR:
pop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
7476660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
PMEI
DUF1218
Motif
Other DBs
NCBI-GeneID:
7476660
NCBI-ProteinID:
XP_024445761
LinkDB
All DBs
Position
18:5010933..5020011
Genome browser
AA seq
573 aa
AA seq
DB search
MSSSDNHNTLKNKKRLFLSLFSSILLVTAIVSIVAGVTSSKNSTESNNDHQVAHTILKSS
CSSTLYPHLCFSALSAVPDATSKIKSKKDVIDLSLNRTMSATRHSYFKIQKLTSTRRSFT
ERENTALHDCLVMLNETLDQLSKAYQELQDYPSLKKSLSVHADDLKILLSAAMTNQETCL
DGFSHDKADKKVRELFIDEEMHVYHMSSIALAIIKNVTDTDMAKEQSLSSGRKLEEENGT
EWPEWLSAGDRRLLQATTVTPNVVVAADGSGNYRTVSEAVAAAPERSSSRYIIRIKAGVY
RENVDVPRSKTNIMFMGDGRTTTIITASRNVVDGSTTFNSATVAAVGDGFLARDITFQNS
AGPSKHQAVAIRVGSDLSAFYRCDMIAYQDTLYVHSLRQFYVSCIIIGSVDFIFGNAAVV
FQDCDIHARRPNPGQKNMVTAQGRSDPNENTGIVIQKCRIGATQDLLAAKSSFRSYLGRP
WKLYSRTIVMQTEISDIIDPAGWFEWDGDFALDTLVYREYQNTGPGANTANRVNWKGFKV
VTSAIEVQPFIARNFIRGASWLPSTGFPYSLDL
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagctccgacaaccacaacacattaaagaacaagaaaaggctcttcttgagcctc
ttttcatctatcctactagtcactgccattgttagcatagttgccggtgtaacctcaagt
aagaattccaccgaatctaacaatgaccaccaagtagctcataccatcctgaaatcctca
tgcagtagtacattgtacccgcacctgtgcttctcagcattatcagctgtaccagatgct
acaagcaagataaagagcaaaaaggatgtaatagatctgtcgttgaatcgaaccatgtcc
gctacccggcatagctatttcaaaattcagaaactcacttctacccgaaggagcttcaca
gagcgagaaaacactgccctccatgattgtctagtaatgttaaatgaaactctagatcaa
ctctccaaggcttatcaggaactccaagactatccatctttaaaaaagtccttatcagta
cacgctgatgacctcaagattctactcagtgctgcaatgactaaccaagaaacttgcctt
gacggtttctctcatgacaaagctgataaaaaggttcgtgaactatttatagatgaagaa
atgcatgtttaccacatgagtagcattgcattggcaataatcaagaacgtaactgacaca
gacatggctaaggagcaatctctatcatcaggcaggaagcttgaagaggaaaacggaaca
gaatggcctgaatggttgtcagcaggggaccggaggctgctgcaagcaacaactgtgact
cctaatgttgttgtggctgcggatgggagtggaaactaccggacagtgtctgaggcagtg
gcggctgcaccagaaagaagtagtagcagatacattataaggattaaagcaggggtttat
agagagaatgtggatgtgccaaggagtaaaaccaatattatgttcatgggtgatggaagg
acaactactatcattactgctagtaggaatgtggttgatggcagcaccacattcaactct
gcaactgttgctgctgttggagacggattcttggccagggatataacatttcaaaattca
gcaggaccatcaaaacaccaagctgttgcaattcgtgtgggatcagacctctcagcattc
tataggtgtgacatgatagcataccaggataccctctatgtacattcacttcgccaattc
tatgttagttgcattataattggctcggtagattttatatttggtaacgcagcagttgta
ttccaagactgtgacatacatgcccgtcgccccaatccaggccaaaagaatatggttaca
gcacaaggccgcagtgaccctaatgaaaacacaggcatagtgatccaaaaatgcaggatt
ggtgcaactcaagatttgctagccgcaaagagcagtttccgttcatatttaggcagacca
tggaagttgtactcgaggactatcgtaatgcaaacagagataagtgatattatagaccct
gcaggttggtttgagtgggatggtgactttgctcttgatacattggtctatagagagtat
cagaatactggaccaggagctaacactgccaatagggtgaattggaaaggtttcaaggtg
gttactagtgcgattgaggtacagccctttattgctagaaatttcattagaggggctagt
tggttgccttccactggttttccttactctcttgatctttaa
DBGET
integrated database retrieval system
