Populus trichocarpa (black cottonwood): 7476782
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Entry
7476782 CDS
T01077
Name
(RefSeq) two-component response regulator ARR1
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
7476782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7476782
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
7476782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
7476782
NCBI-ProteinID:
XP_002322438
UniProt:
B9ID11
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All DBs
Position
15:complement(14511872..14517548)
Genome browser
AA seq
739 aa
AA seq
DB search
MASSQSSNIIQNSSLLKIKILVVDDDSTSLSIVSAMLKTCSYKENRKLELFVVTVKNPFD
ALSTLRLKKGLFDLVVTDLHMPEMNGMELQQQVDEEFKLPVIIMSSDDSEKVILRTLEGG
AAFYIVKPINKDDLKNVWQYAVATKTGKYSLSIKEIGGSQESSSSTVFDQKISVDEVSSA
KSTNIKICNEKDRINKNRKRTKEDQEVDSQLAPKKPKVVWTNSLHSRFLQAINHIGLDKA
VPKRILEFMSVPGLSRENVASHLQKYRIFLKKVAERGTSSSKNLSGRALKSNFASSQPSL
MLKNFQQEYSQFSRQQQVLRASVQAGFGGNTIPTPDGGSNFGSLHSPNQQAPNNNSALQS
PYKQSRSFGNPTGFQQLSFGNANQANKKRSGLESNNNTGTNPPASRESVPNGLTHGKSPM
QIYQPQNQGRSNLQSFDSSEHNKFGSIGVQATNYRSGVGNIGNNNNSLNTNNNYAGIRVN
TDGQLIGAGQLQVSKNKLSNGFGNGGNCGLMNWTHNGNMNVASSSYLAQRGSFPASIESA
NQFPPTLFTSTVYQGNTPMLLPPPPPPPQQQQQLGLGNGGQHDFAFGLVNNSPPIFGGNY
NQQQQFGQGELNFSDMLLEPTNNLTAHQPQGVDQVSTPLHDLLHPDFLNSLHIDDNTPWN
EQPSSQVQSGEEAMNPFFGGNASSMDGYFPNFNQQKENGDLMDSELSSLYPDDNGQTGNQ
VWDDDFLESLFGNESLPMD
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggcatccagtcaatcttccaatattatccaaaattcctccctcttaaaaatcaaaatc
ttagttgtagatgatgattctacatctctttcaattgtttcagcaatgctgaaaacatgt
agttacaaagaaaatcgcaagctagaacttttcgttgtcacagttaagaacccatttgat
gctttatcaactcttcgactgaaaaagggtttgtttgacttggttgtcactgaccttcat
atgcctgagatgaatggtatggagctgcaacaacaagtggatgaagaattcaagcttcct
gtgatcataatgtcatcagatgatagtgaaaaggtcatattaagaactttagagggtggt
gctgcgttttatatagtgaaaccaattaacaaggatgatctcaagaatgtatggcaatat
gcagttgcaactaaaacaggtaagtactccctttcaataaaggaaataggaggcagtcaa
gaatcatcgtcttcgacagtatttgatcagaaaatatctgttgacgaagtgagttctgca
aaatccaccaatatcaaaatatgcaatgaaaaagatagaataaataaaaacaggaagagg
acaaaggaagatcaagaagtagatagccagcttgccccaaaaaagcctaaggtggtttgg
acaaattcacttcacagtcggtttttgcaagctataaaccacatagggctagacaaggct
gttccaaaaagaattcttgaattcatgagtgtgccagggctgtcaagagaaaacgttgcc
agccacttacagaagtatcgtatcttcctaaaaaaggttgcagaaagaggtaccagttca
tcaaagaacttgtcaggacgggctcttaagtcaaactttgcatctagccaaccctcattg
atgctcaaaaatttccagcaagagtattcacaattttcaagacaacaacaagtattaaga
gcatctgttcaagcaggttttggagggaataccattccaactcctgatggtggttccaat
tttgggagcttgcactctccaaaccagcaagctccaaacaacaactccgcacttcaatca
ccatacaagcagtctcgttcatttggcaatccaacagggtttcagcagctatcatttggc
aatgctaatcaagccaataaaaaaagatcaggtttggaatcgaataacaatacaggaaca
aaccctccggcctctcgtgaaagtgtccctaatggcctcacccatggtaaaagtccaatg
cagatataccaaccacaaaatcaaggaagatcaaatcttcagagttttgatagctcagaa
cataacaaatttggttccattggagttcaagctaccaactacaggtcaggagtcgggaat
attggaaacaacaacaattccttgaataccaataataattatgctggaattcgagtgaat
accgatggacaactcattggagcaggccaactgcaagtcagtaagaataaactatcaaat
ggttttggtaatggtggtaattgtggcttgatgaattggactcacaacggcaacatgaat
gttgcatcatcaagctatttggctcaaagagggtcttttccggctagtattgagagtgca
aaccaattcccaccaacattattcactagtactgtttatcaagggaatactcctatgctg
ctgccgccgccgccgccgccaccacaacaacaacaacaacttggtcttgggaatggaggg
caacatgactttgcatttggcctagtgaacaatagtcctcctatctttggtggaaattac
aatcagcagcaacaatttggtcaaggtgaactaaattttagcgatatgcttttggagcct
accaacaatttaactgctcatcagccacaaggtgttgatcaagtgagcactcccttgcat
gacctcttgcatccagacttccttaactcacttcatattgatgacaatactccttggaat
gaacaaccttctagccaggttcaaagtggagaagaagctatgaatcccttcttcggaggt
aatgccagttcaatggacgggtattttcctaactttaatcagcaaaaagaaaatggtgac
ctcatggattctgagctcagtagcctttatccagatgacaatggacaaacagggaatcag
gtttgggatgatgatttcttggaatctttatttggaaatgagtccctcccaatggattag
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