Populus trichocarpa (black cottonwood): 7476835
Help
Entry
7476835 CDS
T01077
Name
(RefSeq) GPI mannosyltransferase 1 isoform X1
KO
K05284
GPI mannosyltransferase 1 subunit M [EC:2.4.1.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
pop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
7476835
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pop01003
]
7476835
Glycosyltransferases [BR:
pop01003
]
GPI-anchor biosynthesis
Core oligosaccharide
7476835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mannosyl_trans
PIG-U
Motif
Other DBs
NCBI-GeneID:
7476835
NCBI-ProteinID:
XP_006368644
UniProt:
U5GNS2
LinkDB
All DBs
Position
1:2356488..2360280
Genome browser
AA seq
506 aa
AA seq
DB search
MKWLKIRTLLLLSAIFRVILIVYGEWQDTHMEVRYTDVDYLVFSDAASLMANGESPYKRT
TYRYSPLLAFLLTPNSFIHRSWGKFIFSAADLFVGSFIQYILKKREVPEDMCLYSAMVWL
LNPFTFTIGTRGNCEPIVCAMILWIIICLINGNVVQAAFWYGLVVHFRIYPIIYALPIVL
VLDPHSFQSGQKPRLVNWKSSQDNASHGRKEGSEVYGVWTALKTIFTRGRIMFAMVSGSV
FMLCTGLFFYLYRWEFLNEALLYHLTRTDPRHNFSIYFYHIYLHVEHEFSVVEKLISFLP
QLIVQLVLIIRFAQDLPFCLFLQTVAFVAFNKVITAQYFVWFFCLLPLILPWSKMKLKWE
GLSCVLLWMGAQTHWLLWGYLLEFKGKNVFLQLWLAGLVFLAANSFLLIMFIRHHKYSPV
FKQFAPATSGNRDKSEINSFVSTELSGTNFQINSTRRKYGSSMTRKNLERDVGRKRVFIL
VSHGLVNFQFERRTSILAGLENCITI
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggctaaaaatccgtaccctgcttctcctctcagccatttttcgtgttattcta
attgtgtacggagagtggcaagatacccacatggaagttaggtacacagatgtagattac
cttgtattttctgatgctgcttcattaatggctaatggtgaatctccttataaaagaact
acctatagatactcacctttgcttgcctttttattgacacccaattcttttattcatcgt
tcttggggcaaattcatcttctctgctgcagatttatttgtgggctcatttattcagtac
attttgaagaaacgtgaggtccctgaggatatgtgtttgtattctgcaatggtatggctg
ctgaatccatttaccttcaccattggaacccgtgggaactgcgagcctatcgtgtgtgcc
atgattttatggatcattatctgtcttatcaatggtaatgttgtccaagctgcattttgg
tatggattggttgtccatttcaggatttatcccataatctatgctcttcctatagttctg
gttcttgatccgcattccttccaatctggtcagaagccacgtcttgtgaattggaaatct
agtcaagataatgcgtctcacggtcgcaaagaaggatctgaagtatatggtgtatggact
gcattgaaaaccatatttacaagagggagaattatgtttgcaatggtctcgggatctgtt
ttcatgctatgtactggtcttttcttctatttatacagatgggagtttttaaatgaggcg
ttgctgtaccatctcactcgtacagatccaagacataatttttccatctatttctatcac
atatatctccatgttgaacatgaattttcagtagtggagaagctcatctcttttttgccc
caattgatagtgcagctggttcttattattcgctttgctcaagaccttccgttctgcctt
ttcttgcagacagtggcttttgtggcattcaataaggtaattaccgcacagtactttgta
tggtttttttgcttgttgcctctaatactgccatggagcaaaatgaagctgaagtgggaa
ggcttaagttgtgtacttctatggatgggagctcagacccattggttgttgtggggttat
ttacttgaatttaaggggaaaaatgttttcctccagctttggttggcaggcttagtgttt
ctggctgccaattcttttcttctgatcatgttcatccggcaccacaaatactctcccgta
ttcaaacagtttgcgccagcaacttcagggaatagagataaatctgagataaacagtttc
gttagtactgagctaagtggaacaaattttcaaatcaacagcacaaggagaaagtatgga
tcaagcatgacaagaaaaaatttggagagagacgttgggagaaaaagagtttttatcctg
gtatcacacggccttgtaaattttcaatttgaacgaagaacaagtattctcgctggacta
gagaactgcatcacaatatga
DBGET
integrated database retrieval system
