KEGG   Populus trichocarpa (black cottonwood): 7476857
Entry
7476857           CDS       T01077                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03010  Ribosome
pop04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    7476857
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    7476857
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:pop03011]
    7476857
   04121 Ubiquitin system [BR:pop04121]
    7476857
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pop04147]
    7476857
Ribosome [BR:pop03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    7476857
  Archaea
    7476857
Ubiquitin system [BR:pop04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   7476857
Exosome [BR:pop04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   7476857
  Exosomal proteins of colorectal cancer cells
   7476857
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Plexin_RBD Dsc3_N DUF2604 UBL_UBAC1 TBK1_ULD OTU1_UBXL Fer2_3 Ubiquitin_5
Other DBs
NCBI-GeneID: 7476857
NCBI-ProteinID: XP_002297752
UniProt: A9P863
LinkDB
Position
1:complement(1907744..1908406)
AA seq 156 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE
CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagaccttgacggggaagaccataaccctcgaggtcgaatcttca
gatacaatcgacaatgtcaaagccaaaatccaagacaaggaaggcatcccaccagaccag
caacgtcttattttcgccggaaaacaactagaagatggacgtacacttgcagactacaac
attcagaaggaatccacactccacttggtgcttcgcttgaggggtggagccaagaagaga
aagaagaagacttacaccaagcccaagaagatcaagcacaagaagaagaaggtcaagctt
gctgttcttcagttctataaagttgacgacagtggcaaagtccagaggctgagaaaagag
tgcccaaatgccgaatgtggggctggtacttttatggctaatcattttgataggcattat
tgtggtaagtgtggcctcacctatgtttatcagaaggctggtggtgactaa

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