Populus trichocarpa (black cottonwood): 7476863
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Entry
7476863 CDS
T01077
Name
(RefSeq) protein indeterminate-domain 12
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7476863
Transcription factors [BR:
pop03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
7476863
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-met
DUF7128
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
7476863
NCBI-ProteinID:
XP_002306797
UniProt:
B9H8D5
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Position
5:21822125..21826800
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AA seq
474 aa
AA seq
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MFPAAMSNSTSLSEEASVSSGTRVQEFGSLNPLASNFSPLQHQQQQQKIIKKKRSLPGNP
DPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRNSKEIKKKA
YVCPEPTCVHHHPSRALGDLTGIKKHYCRKHGEKKWKCEKCSKIYAVQSDWKAHSKTCGT
REYRCDCGTLFSRKDSFVTHRAFCDALAEESARLSAHQLISTDPNAQALLLQNALQAHPI
SLFSAPNPTHQQQISLASPWDPPRHHNPSSNNHQNPVHIKPETHNHFQIPPLLQEPPPPA
LPSHKGLLASTFHSLSNAVTSSAASHHLSATALLQKAASVGAAQTSVGHSQMTQLDMGEL
GSAGQVHVNSASHVAQGPNYNLNSLATWQKSDRLTRDFLGLTGECEDHHGHAASNSNGSS
GGVNASMNVREILTYTGGVGFHQQQYNERDHSLLKPHGGFGFAQPSASKTWGDC
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgttccctgcagccatgtccaactcaacttctttgtctgaagaagctagtgtctcttct
ggcaccagagttcaagaatttggtagcttaaatccattggcttcaaacttctctcctctg
cagcatcagcaacagcaacaaaagatcatcaagaagaagagaagcttaccaggaaaccca
gacccagatgctgaagtgatagcattatctccaaagaccttattggctaccaatagattt
gtgtgtgagatctgcaacaaagggtttcagagagatcagaatcttcagcttcataggagg
ggccataaccttccctggaagctgaagcaaagaaacagcaaagaaattaaaaagaaagct
tatgtttgccctgagcctacgtgtgttcaccaccatccttcaagggctctgggtgacctt
acaggtatcaagaaacactattgcaggaaacatggagagaagaaatggaagtgtgagaaa
tgctcaaagatctatgccgttcaatcagattggaaggctcactctaaaacctgtggaaca
agagagtatagatgtgactgtggaacccttttctccaggaaggatagcttcgtaacccac
agggcattctgtgatgcattagctgaagaaagtgcaagactctcagctcaccagctaatc
tccacagatccaaatgcccaagctctcctccttcaaaacgcacttcaagcacaccccatt
tccctcttctccgcccctaaccctactcatcaacagcaaatctccctcgcttctccttgg
gacccgcctcgccatcacaaccctagtagtaataaccaccaaaacccagttcacatcaag
cctgaaactcacaaccattttcaaatccctccgcttctccaagaaccaccaccaccagca
ttgcctagccacaagggtttgttagcctcaaccttccacagcctatcaaatgccgtcacg
tcatcagcagcatcacaccacttgtcagccactgcactccttcaaaaggctgcaagtgtg
ggtgccgctcagacctcagtgggccacagccaaatgacccagctggacatgggcgagttg
ggatcagcgggccaggttcatgtcaactcagcgagtcacgtcgcacagggtcctaactat
aaccttaacagccttgccacgtggcagaagagtgaccgcctgacaagggactttctgggc
ctgaccggtgaatgtgaggaccatcatggccatgccgcgagtaattcaaatgggagtagt
gggggtgttaacgctagcatgaatgtgagggaaatcctaacgtacacagggggtgtaggg
ttccaccagcagcaatacaatgagagagaccactcactgctgaagccccacggtggtttt
ggattcgctcagccttctgcctctaaaacgtggggtgattgctag
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