Populus trichocarpa (black cottonwood): 7476930
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Entry
7476930 CDS
T01077
Name
(RefSeq) protein SCARECROW
KO
K27742
protein SCARECROW
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7476930
Transcription factors [BR:
pop03000
]
Eukaryotic type
Other transcription factors
GRAS
7476930
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GFIT
Motif
Pfam:
GRAS
Motif
Other DBs
NCBI-GeneID:
7476930
NCBI-ProteinID:
XP_002306863
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All DBs
Position
5:22736526..22738395
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AA seq
520 aa
AA seq
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MMKGAYEVVHGALNMIQPHETWDYASVGFPAPISNPFPKPAVIENRCLNLERNELSEWVE
HVTKQLIDDLPDIATDHDESLQTDTTTVYGGNDIVSSLLGEFRPKKYMRRSYFDGNGEEL
QWSHELGVHQTNISEKEGSTRSPSMSRIDENGLSLITLLLECAVAISVDNLGEAHRMLLE
LTQMASPYGPSCAERVVAYFSKAMGSRVINSWLGICSPLINHKSIHGAFQVFNNASPFIK
FAHFTSNQSILEAFHRRDRVHVIDLDIMQGLQWPALFHILATRIDGPPQVRMTGMGTSME
LLLETGRQLSNFAKRLGMSFEFHPIAKKFGEIDASMVPLRRGETVAVHWLQHTLYDATGP
DWKTLRLLEAVAPRVITLVEQDISHGGSFLDRFVGSLHYYSTLFDSLGAYLPCDDPGRHR
IEHCLLYREINNILAIGGPARSGEDKFRQWRSELARSSFMQVPMSGNSMAQAQLILNMFP
PAHGYNLEQGEGTLRLGWKDTSLFTASAWTTRASRWPLIN
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagggagcatacgaagtggttcatggggctcttaatatgatacagccccatgaa
acatgggactatgcctctgtaggattcccggctccaatttcgaacccctttccaaagcct
gcagtgattgaaaatcgatgcctaaacttggagaggaatgagctctctgagtgggttgaa
catgtaaccaagcagctcattgatgacttgccggatatagcaactgatcatgatgaaagc
ttgcaaacagacacaacaacggtctatgggggcaacgatattgtctcgtcactcttgggt
gagtttaggccaaagaaatatatgaggagaagctattttgatggaaatggggaagagctc
caatggagccatgagcttggagtacaccaaacaaacatttctgaaaaagaagggagcact
agatcaccaagcatgagtaggatagatgaaaatggtttgagcttaataacccttcttttg
gagtgtgctgttgctatatcagtcgataatcttggtgaagctcatagaatgttgcttgag
ctgacccagatggcttctccttacggcccttcttgtgctgaaagggttgtggcttatttt
tctaaggccatgggtagtagggttattaactcatggctaggtatttgctctccgttaatc
aaccacaagagcattcatggcgccttccaagtcttcaacaatgcctctccttttatcaaa
tttgctcacttcacctccaaccaatcaatcctagaagcttttcatcgccgcgatagggtt
cacgtaattgacctcgatatcatgcaaggcttgcaatggccggccttatttcacatccta
gccaccagaattgacggtccaccccaagttcgaatgaccggcatgggcacatcaatggaa
ctcttactggagactgggagacaactttccaatttcgctaagcgacttggaatgtcgttt
gagttccacccaattgcaaagaaatttggagaaattgatgcctcgatggtgccactcagg
agaggtgaaacagtagccgtgcattggctacagcataccctctatgatgccacaggacct
gattggaagacattgagactactcgaagcagtggccccaagagtgatcactctagttgag
caagacatctcacatggtggatctttcttggaccgtttcgtaggctctctgcattactac
tcaacattgtttgattccctcggtgcatatttgccttgcgatgatcctggcaggcaccgc
atagagcattgccttctctacagagaaatcaataatatattggcaataggagggcctgca
agaagcggcgaggacaagttcaggcaatggagaagtgagctagctagaagctcgttcatg
caggtgccaatgagtggaaactcaatggcccaagcacagcttatactgaacatgttccct
cccgctcatggctataaccttgaacaaggagagggaacattgaggctgggttggaaggat
actagcttgttcactgcatctgcttggactacacgtgcttctagatggcctctaattaat
taa
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