Populus trichocarpa (black cottonwood): 7477048
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Entry
7477048 CDS
T01077
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03015
mRNA surveillance pathway
pop04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
7477048
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
7477048
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pop01009
]
7477048
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7477048
03036 Chromosome and associated proteins [BR:
pop03036
]
7477048
Protein phosphatases and associated proteins [BR:
pop01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
7477048
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
7477048
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
7477048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
7477048
NCBI-ProteinID:
XP_024466571
LinkDB
All DBs
Position
10:complement(8575111..8579370)
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AA seq
507 aa
AA seq
DB search
MLKQILSKLPRKSSKSTANRDHSGNHAANSNASSGSRSSGGKSANSSISSIAVNSSVPDV
AIHHGVNSKLNGTLGFSQYEGLPGFKDVPNSEKQSLFIKKLNMCCFLFDFTDPTKNLKEK
EIKRQTLLELVDYVTSISGKFSETAMQEVMKMVSANLFRTFTPQPRENKVIDGVDLEEDE
PSMDSAWPHLQIVYELFLRFVSSTETDAKLAKRYIDQPFVRKLLDLFDSEDPREREYLKT
ILHRIYGKFMVHRPFIRKSINNIFYQFIFETEKYNGIAELLEILGSIINGFALPLKEEHK
MFLVRAMIPLHKPRCLAMYHQQLSYCITQFVEKDCKLADTVIQGLLKYWPVTNSSKEVMF
LNELEEVLEATQPSEFQRCIVPLFQQLARCLNSSHFQVAERALFLWNNDPIENLIIQNRK
VILPIIFPALEKNARNHWNQAVRSLTLNVRKIFEDLDHELFNECLLKFQEDEKKEVEIKA
RSEAAWKRLEEIAAQKTASDDTVVVPC
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaacaaatacttagtaagcttccgcgaaagtcatctaagtcaactgcaaatcgt
gaccacagtggtaatcatgcagccaattcaaatgcttctagtggctcaagaagtagtggt
ggcaagtccgccaattcaagcatctcatccatagcagtgaatagttctgtcccagatgta
gcaattcatcatggagtgaattcgaagttgaatggaactctagggttttctcagtatgaa
ggactgcctggattcaaggatgttccgaactctgagaagcagagtttgtttattaaaaag
ttgaacatgtgttgtttcttatttgactttactgatcctacgaagaacctcaaggaaaag
gagataaagcgacagacattactggagttggtggattatgtaacttccattagtggtaaa
ttctctgaaactgctatgcaagaggttatgaaaatggtgtctgcaaacttgtttcggaca
ttcacccctcaaccacgtgagaacaaagttatagatggtgttgatttggaggaggatgag
ccttcaatggattcagcatggccgcacttgcaaattgtgtatgaacttttcttaaggttt
gtatcttctaccgagacagatgcaaaattggcaaaaagatatatcgatcaaccctttgtt
cgtaagttgctggacttatttgactctgaagatcccagagaaagggaatacttgaaaaca
attcttcaccgcatctatggaaaattcatggtgcatcgtccattcatcaggaaatctatc
aataacattttctatcagtttatttttgagactgagaagtacaatggtattgctgaactt
ttagaaattctgggcagtatcattaatgggtttgctctgccattgaaagaagaacataaa
atgtttcttgttcgtgctatgattcctctgcacaagccaagatgcttagcgatgtatcac
caacaattatcttactgcattacacagtttgtggagaaagactgcaagcttgctgatact
gtaatacagggattgttgaagtactggcctgtcactaatagttcaaaggaagtcatgttc
ctaaatgagctggaggaggttttagaagcaacccagccatcggaattccagcgctgtata
gtgcccttgtttcagcaacttgctcggtgtttgaacagttcacactttcaggtggcagag
agagcattgttcttgtggaacaatgatcccattgagaacttgatcatacaaaatcgcaag
gttatactacccataatctttcctgctctggagaaaaatgctagaaaccactggaatcaa
gctgtccgtagcttgactttaaatgtacgcaagatctttgaagatcttgatcatgagctg
ttcaatgaatgcctactaaagtttcaggaagatgaaaagaaggaagttgaaattaaagca
agaagtgaagctgcatggaaacggttagaagagattgctgctcagaaaactgcaagtgat
gacacggtggttgttccttgctaa
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