Populus trichocarpa (black cottonwood): 7477049
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Entry
7477049 CDS
T01077
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform isoform X1
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
7477049
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pop01009
]
7477049
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7477049
03036 Chromosome and associated proteins [BR:
pop03036
]
7477049
Protein phosphatases and associated proteins [BR:
pop01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
7477049
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
7477049
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
7477049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
AAA_33
Motif
Other DBs
NCBI-GeneID:
7477049
NCBI-ProteinID:
XP_002314559
UniProt:
B9HTC9
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All DBs
Position
10:complement(8566837..8573375)
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AA seq
526 aa
AA seq
DB search
MIKQILGRLPKKPSKSSENREFGGPSIAPSNTSSASKSTSDFQSNRLGTLNNSSPPGLDS
APHLGFSHGMKPTQAGNPKLNGSSVPPPYEALPTFRDVPNSEKQNLFIRKLNLCCVVFDF
ADPTKNLKEKDIKRQTLLELVDYITSANGKFTETVMQEVIKVVSVNLFRPRTPQTRENKV
LEAFDLEEEEPMMDPAWPHLQIVYEFFLRFVASPETDAKLAKRYVDHSFVLKLLDLFDSE
DPREREYLKTILHRIYGKFMVHRPFIRKAINNIFFRFIFETEKHNGIAELLEVLGSIING
FALPLKEEHKLFLVRALIPLHKPKCLPMYHQQLSYCITQFVEKDCKLADTVIRGLSKYWP
ITNSSKEVMFLSELEEVLEATQPAEFQRCMVPLFRQIARCLSSSHFQVAERALYLWNNDH
IENLIRQNRKVILPIIFPALEKNGRNHWNQVVQSLTVNVRKIFADIDPELFEECLRQFQE
NEAKAEEIKTKQEATWKRLEEIAATKATSSEAVLVPWAIPTLTSSG
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacaaatacttggtaggcttcccaagaagccttccaagtcatccgagaatcgt
gaatttgggggtccatctattgctccttcaaatacttcctcagcttctaaaagcaccagt
gatttccagagcaacagacttggaactttaaacaactcatctcctcctggtcttgattct
gctcctcatttaggttttagtcatggaatgaagcctacccaggctgggaatccaaagctg
aatggcagttcagtgcctccaccgtatgaagcattgcctacattcagggatgtcccgaat
tctgagaagcaaaacttgtttattagaaagctcaacttgtgctgtgtggtgtttgacttt
gctgaccccactaaaaatttgaaagagaaggatatcaagcgccagacgttgcttgagctc
gtggattatattacttctgcaaacgggaagttcacggaaactgtcatgcaagaagttata
aaggtggtatctgttaatttatttaggccgcgtactccacagacccgggagaataaggta
ttagaggcctttgatttggaagaggaggagcccatgatggacccagcatggcctcacttg
caaattgtgtatgaattctttcttagatttgttgcatcacctgagacagatgcaaagttg
gctaagaggtacgttgatcactcttttgttctcaagttgttagatctctttgattctgag
gatccaagggagagagagtatctgaagacaattctacatcgcatctatggaaagtttatg
gtgcatcgtccattcatcaggaaggctatcaataatatcttcttccgttttatttttgaa
acggagaagcataatgggattgctgagcttttagaggttttgggtagcataatcaatggg
tttgctttgccgctaaaagaagaacacaaattgttccttgttcgggcactgatccccctt
cacaagccaaagtgtttacctatgtaccatcagcaattatcatactgcattacacagttt
gtggagaaagactgcaagcttgctgacactgttataagaggtttatcaaagtactggcca
attactaatagttccaaggaggtcatgttcctaagtgagttggaggaagtcttagaagca
actcaaccagcagaattccaaagatgtatggtacccctgtttcgtcaaatagctcgttgc
ttgagcagttcacacttccaggtggcagaaagggctttgtacttgtggaacaatgatcat
attgagaacttaattagacagaaccgcaaagttatactccccattatctttcctgccctg
gagaaaaatggacgtaaccactggaatcaggtggtgcagagcttaacggttaatgttcgc
aagatctttgctgatattgaccctgagctgttcgaggagtgcttacgccagtttcaagaa
aatgaagcgaaggcagaggagatcaaaacaaaacaagaagcgacctggaagcgcttagaa
gagattgcagcaacaaaagccacgagtagtgaagcagtccttgttccctgggctataccc
accttaacatcttccggctag
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