Populus trichocarpa (black cottonwood): 7477058
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Entry
7477058 CDS
T01077
Name
(RefSeq) two-component response regulator ARR11 isoform X2
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
7477058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7477058
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
7477058
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
7477058
NCBI-ProteinID:
XP_002315642
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Position
10:8460195..8464795
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AA seq
546 aa
AA seq
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MMENGFSSPRNDSFPAGLRVLVVDDDPTWLKILEKMLKRCSYEVTTCGLARDALNLLRER
KGGYDIVISDVYMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKP
IRMKELRNIWQHVFRKKIHEVRDIEILEGIESFQMTRNGSDLYEDGHFLCGEDLTLIKKR
KDIESKHDEKDIGDNTSAKKARVVWSVELHQKFVKAVNQIGFDKVGPKKILDLMNVPRLT
RENVASHLQKYRLYLSRLQKGNDFNNPVGMIKQSDSPLSDSAGSFGSQNSINLQPTDVSN
GCYGFSVSSLVLHNVDPRSHNGDRKILVTTPVAEPKRGVTVDAPNPRKPRISQMEFGHPL
APHFNDGFSHLPMPGQKQLTRADYPQPARAISSAHSLTEREIGCPVKIKPSRNDYGSNAS
HVSSTANAVDSIPLQTKTNSTNHQVSSTSSMENQGLNMNCLTDVESSRKNINLGMPPFAP
LDEDLQVRFVPGDYYMNLGLQNIEVPEYFDPSLLTDVPIHLNDGLRFDYEFYDPTEYSLI
DQSLFI
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgatggagaatggtttctcctctccccggaatgattcgtttcctgctggtctccgtgtt
ctcgttgtcgatgatgatcccacctggttaaaaatccttgaaaagatgctcaagagatgc
tcttatgaagtgaccacctgcggtttggcaagagatgctttgaacctacttcgtgagagg
aaaggtggatatgacattgtaatcagtgacgtctacatgcctgacatggatggtttcaaa
ctgttagagcatgttggactggagatggatcttcccgtaattatgatgtctgttgatgga
gagacgagcagggtgatgaaaggtgtccaacacggagcttgtgattatcttcttaagcct
atacgaatgaaagaactccggaatatatggcagcatgtattcagaaagaaaatacacgag
gtaagagatattgaaattctcgaagggatcgaaagttttcaaatgactagaaatggatca
gatctatatgaggatggccattttctctgtggagaagaccttactttgataaagaaaaga
aaagatatcgaaagcaagcacgatgaaaaagacattggtgataatacttctgcaaagaaa
gctagagtagtttggtctgtagaacttcatcagaaatttgtcaaagcagtaaatcagata
ggatttgataaagttggtccaaagaaaatacttgacttgatgaatgtgccgcgtttgaca
agggaaaatgtcgctagccatttgcagaaataccgtctctatttgagtagattgcagaaa
ggaaacgattttaacaatcccgttggtatgataaagcagtcggactcacctttgagtgat
tctgctggaagttttggctctcagaattcaatcaatttgcagccaactgatgtttcaaat
gggtgctacggattttctgtcagtagcttggttcttcacaatgtggatcccagaagccac
aatggtgatagaaagatacttgttacaacgcctgtggcagaacccaaaagaggcgtaaca
gttgatgctcccaatcctcgtaaacccaggatttcacagatggaatttggccatcccctt
gcacctcattttaatgatgggtttagccacctaccaatgcctggtcagaagcagcttaca
cgagctgattatccacagcctgctcgagccatcagttctgcacattccttgacagaaaga
gaaattggttgccctgtcaaaattaagccttcacgtaatgactacggcagcaatgccagc
catgtaagttcaacagcaaatgcagttgactctatccctcttcaaacgaagaccaactcg
acaaatcatcaagtgtcaagcacttctagtatggaaaatcaaggcttgaatatgaattgc
cttacagatgtggaatcttccagaaaaaacataaatttgggaatgccgcctttcgctcct
ttggatgaggacttgcaagtacgttttgttccaggtgattactatatgaatctcgggctc
caaaacatagaggttccggaatattttgacccaagtcttctcacagacgtaccgatacac
ttgaatgatgggctgaggtttgactatgagttctatgaccccacagaatattctctaata
gatcaaagcttgtttatatga
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