Populus trichocarpa (black cottonwood): 7477067
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Entry
7477067 CDS
T01077
Name
(RefSeq) T-complex protein 1 subunit epsilon isoform X1
KO
K09497
T-complex protein 1 subunit epsilon
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pop03110
]
7477067
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pop03037
]
7477067
04147 Exosome [BR:
pop04147
]
7477067
Chaperones and folding catalysts [BR:
pop03110
]
Heat shock proteins
HSP60 / Chaperonin
7477067
Cilium and associated proteins [BR:
pop03037
]
Primary cilia and associated proteins
BBS-CCT complex
7477067
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
7477067
Exosomal proteins of colorectal cancer cells
7477067
Exosomal proteins of bladder cancer cells
7477067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
7477067
NCBI-ProteinID:
XP_002315646
UniProt:
B9HTF6
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All DBs
Position
10:8337742..8344022
Genome browser
AA seq
535 aa
AA seq
DB search
MALAFDEFGRPFVIIKEQDQKVRLRGLDAQKANIASGMAVSRILRTSLGPKGMDKMLQSP
DGDVTITNDGATILEQMDVDNQIAKLLVELSRSQDYEIGDGTTGVVVLAGALLEQAQKLL
ERGVHPIRVAEGYETASRIAVEHLEKIAQKFDFGVNNIEPLVKTCMTTLSSKIVNRCKRS
LAEISVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELIYGILVDKEMSHPQMPKQIE
DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRKQEQQYFDNMVQKCKGVGATLVICQW
GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFEELTPEKLGKAGLVREKAF
GTTKDRMLYVEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS
SEISCSISVEAAADRYPGVEQYAIRAFADALDSVPMSLAENSGLQPIETLSAVKSQQIKE
NNPYCGIDCNDAGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSDF
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcgttagcgtttgatgaattcgggagacccttcgtaatcataaaagaacaagaccag
aaggttcgattgagagggctcgatgctcaaaaggccaacattgcttctggtatggcggtc
tctcgcatccttcgaacctccctcggtcccaaaggcatggacaaaatgctccagagcccc
gacggcgatgtcaccatcacaaatgatggtgctacgatattggagcaaatggatgtggac
aatcagattgcaaaactgttggttgagctttcgcggagtcaggattatgaaataggggat
gggactactggtgttgttgttctggctggtgctcttttagagcaggctcagaagctgttg
gagcgtggggttcaccccattcgcgttgccgagggttacgagacagcttctagaattgct
gttgaacatttggagaagattgcacagaagtttgactttggagttaataatattgagccc
ttggttaaaacttgcatgactactttgtcttccaagattgtgaatcggtgcaaacgcagt
ttagcagagatttctgttaaagcagtccttgccgttgcagatttagagaggaaagatgtt
aatctagatttgataaaggttgaggggaaagtcggaggcaagttggaagatactgaactg
atttatgggatacttgttgacaaagaaatgagtcatccgcagatgccaaagcaaattgaa
gatgcaaaaattgctatcttgacctgcccctttgaaccacctaagccaaagactaaacat
aaggtggacattgatacagttgaaaagtttcaaactttgcgtaagcaagagcagcagtac
ttcgataacatggttcagaaatgcaagggtgtaggtgcaaccttggttatctgtcaatgg
gggtttgatgatgaggcaaatcatttattaatgcacaggaacttgcctgcagtccggtgg
gttggtggtgtagagttagagctgatagcaatagccacaggtggaagaatagtgccaagg
ttcgaggagttgacaccagaaaagctaggaaaggctggtttggttcgagaaaaggctttt
ggcacaacaaaagatagaatgctgtatgttgaacactgtgcaaattcaagggcagtaacc
atatttattcgtggaggtaacaaaatgatgattgaggagacaaagcgtagcatccatgat
gcattgtgtgtggcaaggaatctcattcgcaacaattctattgtatatggtggtggctca
tctgagatttcctgctcaatttctgtggaggccgcagcagatagatatccaggagttgag
cagtatgctatcagggcatttgcagatgctttagattccgtccctatgtcgcttgcagaa
aatagtggcctccaacccattgagacattatctgctgtgaaatctcaacaaattaaggag
aacaatccttactgtggaatagattgcaatgatgctggtacaaatgacatgcgagagcaa
aatgtatttgagactcttatcggaaagcagcagcagattttgctagcaacacaagttgtc
aaaatgattctaaaaatcgacgatgtcatctccccttctgatttctga
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