Populus trichocarpa (black cottonwood): 7477080
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Entry
7477080 CDS
T01077
Name
(RefSeq) eukaryotic translation initiation factor 4B2
KO
K03258
translation initiation factor 4B
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7477080
03012 Translation factors [BR:
pop03012
]
7477080
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
7477080
mRNA cycle factors
Stress granule specific factors
7477080
Translation factors [BR:
pop03012
]
Eukaryotic type
Initiation factors
eIF-4
7477080
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
eIF-4B
DUF1501
Nup54_57_C
Motif
Other DBs
NCBI-GeneID:
7477080
NCBI-ProteinID:
XP_002314589
UniProt:
B9HTR6
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Position
10:complement(8026107..8033718)
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AA seq
522 aa
AA seq
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MSKKWGKIGAWAADSEQAEEEERAAAAAAVSQSFPSLKEAAGTAKPKKKKMSLNEFYSTP
SGGGVESKGLTPDEMFRLPTGPKERSAEEMQHGHLGGGFSNYGRTGPPPGRMRDRDNTDG
SWGGGGGRRQFGGGFDDERRGQPPSRVSDYDQPSRADEVDNWAMAKKPQPSFDSGRQSRY
SSLGGGGGDGGGSRADEVDNWAVDKKPLPIRPSTFGSGFRDSGPEPDRSSRGGYREPERE
RPRLVLDPPRVEVVVNEPVKTNRSNPFGTARPREDVLAEKGLDWKKLEMEMEAKKNSSLQ
SSRPTSAHSSRPSSAQSNRSEGPGLLHQGFENVAAKPRPRVNPFGEAKPRELLLQERGQD
WIKIDRELEHRGVDRPETEEEKLLKEQIEHLKTELEKATKVNQEPQQVSVDDLPSLREMI
NEKERELEILVRDLDDKVRFGPKAIERPGSGAGRSPGFSERPPSRPGSFDESRSMEFMDR
PRSRGKPDIWARPADEQRSFQGGRERGFLGSRDFDRQRTDRW
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaagtgggggaaaatcggtgcatgggcagccgattccgagcaagccgaagaa
gaggagcgcgcagccgctgcagcagccgtttctcaaagcttccccagcctgaaagaagct
gctggaaccgctaagcctaaaaagaagaaaatgtctctcaacgaattttattccacaccc
agcggcggcggtgttgaatccaaaggcttgactcctgacgagatgttccgcctccctaca
ggtccaaaagagcgttccgctgaagaaatgcaacatggacacctcggtggtggattttcc
aattacggtcgaaccgggccgcctcctggacgtatgcgtgatcgtgacaacaccgacggg
tcttggggtggtggtggtggtagaaggcaatttggtggtggttttgatgatgaacgaaga
ggccaacctccttctagggtttctgattacgatcagccttcgcgtgctgatgaggttgat
aattgggcaatggcgaagaaaccgcaaccttcttttgattctggacgacaaagtcgttac
agttcactcggaggtggcggtggtgacggaggtggttctagggctgatgaagttgataat
tgggcagttgataaaaaaccgttacctattcgaccttctacttttggttcgggttttcgt
gattctggaccggagcctgatcgctcgagcagaggaggatatcgtgagccagagagggag
aggcctagattggttctggatccaccaagagttgaagttgtagttaacgagcctgtaaaa
acaaacaggtctaatccatttgggacagcgaggccgagagaagatgtgttggcagagaaa
ggattggattggaagaagctggagatggaaatggaagctaagaagaactcgagcttacaa
tctagcaggccaactagtgcacattctagcagaccttctagtgcccaatcgaataggtct
gaagggccagggctgctgcaccaagggtttgagaatgtggctgcgaagccgaggccgagg
gtgaatccttttggagaggcaaagcccagggaactgttgttgcaggaaagaggtcaagat
tggataaagattgaccgtgagttggagcatcgtggggtagataggcctgaaactgaagag
gaaaagttattgaaagaacaaatagagcatttgaagacggagcttgagaaagcgacaaaa
gtgaatcaggaacctcaacaagtttctgttgatgacctacccagtttaagggagatgata
aatgagaaagaaagggaattagaaatattggtccgtgatttggatgacaaagttcgattt
ggaccaaaagccattgaaaggccaggttctggggcaggcaggtctcctgggttttcagag
agacctccttcgcgacctgggtcatttgacgagtcgagaagtatggagttcatggatagg
cctcgatctcgtggcaagccagatatttgggcaaggcctgctgacgagcaaagatcattt
caaggtggcagggaaagaggatttctgggtagcagagattttgacaggcaaaggacggat
aggtggtga
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