Populus trichocarpa (black cottonwood): 7477109
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Entry
7477109 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7477109
KO
K15559
regulator of Ty1 transposition protein 103
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pop03021
]
7477109
Transcription machinery [BR:
pop03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
7477109
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
TEX13
CTK3
DUF1598
Motif
Other DBs
NCBI-GeneID:
7477109
NCBI-ProteinID:
XP_024457896
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All DBs
Position
5:5497362..5501512
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AA seq
525 aa
AA seq
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MNSTFSEETLADNLSKVNGTQQCIESLSRWCIVHRSKAESVVEAWDKQFRNSAMLQKVPL
LYLANDILQNSKKKGSEFVNEFWKVLPAALKNIVKKGDDRGKNVVSRLVNIWEERTVFGS
RARSLKEVMLGEDAPPPLELSKKRSRSVKNTKRDSRSIRTKLSIGGAAEKLVSAFNLVVS
ERPNEEAEMSNCKSAVCRTRDMKKDVDIACSNNDKDPTRKTLAKKLENEENLLKRSIEKL
KSVEACRVALVSQLKESLQEQESELEEVRALRQVAQAQVEEASKMRRLLIGEEVSKASTV
TTVPVDSNAKAGQAPKRTAAAIAAEVAEKLAASSSSQMIMHAVLSTFAAEEAKNAQLTKA
PTLSNSYASMPVQSLSKPENSLPVSDSNVFMPAQPLAAPTTHSYQPVLLPQPTMPNQTPT
TQAQFNPSSQQYLQPAGGIMTPYAYGNTSPLPPGPPPPPPYQASSMVPMAHQPSQMPQQQ
PLSLAQQRNIINQQQPMSLTQQTLGANFRPHQPPVMEYYAHPSHS
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtacatttagtgaagagacacttgcagataacctttccaaggtcaatggtacc
cagcaatgtattgaatctttgtcgcgctggtgcatagttcaccgaagcaaagcagaatct
gttgttgaggcatgggacaaacagttccgcaactcagctatgctccagaaagtacctcta
ttgtatcttgcaaatgacatcctacagaacagtaagaagaaaggaagcgaatttgttaat
gagttttggaaagttcttcctgcagcgctaaaaaatatagtcaagaaaggtgatgaccgt
ggcaagaatgtcgtctctagattggtaaatatatgggaagaaaggacagtgtttgggtca
cgtgctcggagtctcaaagaggtgatgcttggagaagatgctcctccacccttggagttg
agcaaaaaacgttcacgctctgtgaaaaatacaaaacgagattcacgatccattagaacg
aaattgtctattggaggtgctgctgaaaaactagtatcagcatttaacttggtggttagt
gagcggcccaatgaagaggcagagatgagtaattgcaagtctgcagtttgtcgtacgagg
gatatgaagaaagatgttgatattgcctgtagtaataatgataaagatccaacacgaaaa
actttggccaagaaactggagaatgaagagaatcttttgaaacgaagtattgagaaactt
aaatcagttgaagcatgtagagtagcgcttgtctcacagttaaaagaatctttacaggaa
caggaatctgaactggaggaagttcgagctctgaggcaggtcgcacaggcacaagtagag
gaagccagcaaaatgcgaaggttgcttattggtgaagaagtatctaaagcatctacagta
actacagtaccagttgattcaaatgcaaaagcaggacaagcacctaagaggacagctgca
gctattgctgccgaggttgcagagaagcttgcagcttcctcctcttctcaaatgatcatg
cacgctgttctctctacatttgcagctgaagaagcaaaaaatgctcaattaacgaaggcc
ccaacactgtcaaattcatatgcatccatgcccgtccaatcattgtcaaaaccggaaaac
tcattgcccgtatcagattcaaatgtttttatgccagcacagccacttgctgctccaaca
acacactcatatcagccagttttgttgccccagcctactatgccgaaccagaccccaacc
actcaagctcaatttaacccatcctcccagcaatatttacagccagcaggtgggatcatg
accccatatgcttatggtaacacctctcccttacccccaggaccacccccacccccaccc
taccaggcaagttcaatggtgcctatggcgcatcaaccatcacaaatgccacagcagcaa
ccattatcattggcacagcagcggaacataataaaccagcaacaaccaatgtctttaact
caacaaactctgggtgctaatttcaggcctcatcaaccacctgtaatggagtactatgcc
cacccttctcattcctag
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