Populus trichocarpa (black cottonwood): 7477123
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Entry
7477123 CDS
T01077
Name
(RefSeq) cytoplasmic tRNA 2-thiolation protein 1 isoform X2
KO
K14168
cytoplasmic tRNA 2-thiolation protein 1 [EC:2.7.7.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
7477123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pop03016
]
7477123
Transfer RNA biogenesis [BR:
pop03016
]
Eukaryotic type
tRNA modification factors
Thiolation factors
7477123
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP_bind_3
zn-ribbon_14
tRNA_Me_trans
DUF7573
Motif
Other DBs
NCBI-GeneID:
7477123
NCBI-ProteinID:
XP_024457817
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Position
5:complement(5739870..5745854)
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AA seq
309 aa
AA seq
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MAENHKKAAGRLCYLCNQRRAALKRPKTLEQICRECFYEVFEEEIHQVIVKNQLFKPGER
IAIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQYGL
PLKIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLVTGHNADDI
AETVLLNILRGDIARLSRCTSITTGEDGPIPRCKPFKYTYEKEIVMYAYFKRLDYFSTEC
IYSPNAYRGFAREFIKDLERMRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYISSQL
RGLPLWEVR
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaatcacaagaaagctgcgggtcgcctgtgttacctttgtaaccaaagaagg
gctgccctcaaaagacctaaaaccctagagcagatatgcagggagtgtttctacgaggta
tttgaggaagagattcatcaggtgattgtgaaaaaccagctgtttaagcccggtgagcgg
attgcaatcggtgcctccggtggaaaagattcgacagtgcttgcttatgttttatccgag
ttgaatcgtcgacacaattatgggctggatctcttcctcttgtctgttgatgaaggcatt
actggatatagggatgactcccttgagacggttaaaagaaatgaaattcagtatgggctg
ccgttaaagattgtttcctacaaggatttgtatggatggacgatggatgagatagtgaag
atgattggtttaaagaacaattgtacattttgtggtgtttttcgtaggcaggcccttgat
cgtggcgctgcattgttgaaagtagacaagctggttaccggacacaatgcagatgatatt
gccgaaactgtactcttgaatatattgcgaggggatattgctagattgagtagatgcact
tcaataaccactggggaggatggaccaattccaagatgcaagccatttaagtacacctat
gagaaggagattgttatgtatgcttatttcaagaggctggactacttctccactgaatgc
atatattcacctaatgcatatcgtggttttgctcgtgagttcatcaaagatttggagagg
atgagaccaagggcgatacttgacattatcaaatcaggggaagattttagaatttccact
tctacgaaaatgccggagcaggggacatgtgaacgatgtggttacatttcaagccagtta
cgagggcttcccttatgggaggtgcgctga
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