Populus trichocarpa (black cottonwood): 7477149
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Entry
7477149 CDS
T01077
Name
(RefSeq) F-box/LRR-repeat protein 4
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7477149
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
7477149
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_RPS2
LRR_At5g56370
LRR_At1g61320_AtMIF1
LRR_8
LRR_14
F-box_5
Motif
Other DBs
NCBI-GeneID:
7477149
NCBI-ProteinID:
XP_002307150
UniProt:
B9H5N9
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Position
5:complement(6188752..6191430)
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AA seq
406 aa
AA seq
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MASICINEKLTDDELRSILSKLENDKDKEIFGLVCKRWLGLQSNGRKRLAARAGPHMLQK
MAARFSRLIELDLSQSVSRSFYPGVTDSDLAVIADGFRCLKVLNLQNCKGISDKGMSSIG
GGLSSLQSLNVSYCRKLTDKGLSAVAEGSQGLRSLHLDGCKFVTDVVLKALSKNCPNLEE
LGLQGCTSITDCGLADLVSGCRQIHFLDINKCSNVGDSGVSTVSEACSSFMKTLKLMDCF
RVGNKSILSLAKFCKNLETLIIGGCRDISDESIKSLATSCQSSLKNLRMDWCLNISNSSI
SFILTKCRNLEALDIGCCGEVTDAVFHGLGAMETEMRLKVLKISSCPKITVTGIGMLLDK
CNSLEYLDVRSCPHITKSGCDEVGLQFPDCCKVNFNGSLNEPDVLP
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcttctatttgcataaatgagaaattaacagatgatgaactaagatcaatattatca
aagctagagaatgataaggacaaggagatatttgggctggtttgtaagagatggttaggt
ttgcagagtaatggaaggaagagacttgctgctagagctggacctcacatgcttcaaaag
atggctgctaggttttctagattgattgaattggacttgtctcagtctgtttcaaggtct
ttctatcctggtgttactgattctgatcttgctgttattgctgatggttttagatgctta
aaggtcctgaatttgcagaattgtaaaggtatctcagataagggaatgtcatcaattgga
ggtggtctttcatctctacaatccttgaatgtatcctattgcagaaagctaacagacaag
ggattgtcagctgttgctgagggcagtcaaggtctgcgaagcctgcatcttgatggatgc
aaatttgttactgatgtagtactaaaagctctttctaagaactgtccaaatctagaagag
ttgggcctgcaaggttgtaccagcataactgactgtggacttgcagatcttgtcagtgga
tgtcggcagattcatttcttagatatcaataaatgcagtaatgtgggggacagtggggtt
tccactgtttcagaggcatgctcatctttcatgaagacactaaagctgatggattgtttt
agagttgggaacaagtctattttatctctggccaagttttgcaaaaatctggaaaccctc
atcattggtggctgtagagacatctctgatgagtctataaaatccttggccacttcctgt
caaagcagtttgaagaacttgcgcatggactggtgtttaaacatctcaaactcttcaata
agcttcatcctcactaagtgcagaaacctggaggctcttgatattgggtgctgcggggag
gttacagatgctgtctttcatggtttaggggctatggaaaccgaaatgaggctgaaagtt
ttgaaaatcagtagctgcccaaagatcacagtgactgggataggcatgcttttggataaa
tgcaactctttggaataccttgatgtaaggtcctgcccgcacattaccaagtcaggttgt
gatgaggttggattgcagttccctgactgctgtaaagtgaatttcaatggaagtttaaat
gagccagacgttctaccgtga
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