Populus trichocarpa (black cottonwood): 7477193
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Entry
7477193 CDS
T01077
Name
(RefSeq) two-component response regulator ARR2 isoform X1
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
7477193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7477193
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
7477193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
DNA_pol_phi
Spore_coat_CotO
eIF-3c_N
Motif
Other DBs
NCBI-GeneID:
7477193
NCBI-ProteinID:
XP_024466703
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Position
10:115175..119326
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AA seq
680 aa
AA seq
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MLNLGYCKGSMSTASSGGVSDQFPAGLRVLVVDDDPTCLVILEKMLRTCLYEVTKCNRAE
IALSLLRENRNGYDIVISDVHMPDMDGFKLLELIGLEMDLPVIMMSADDGKNVVMKGVTH
GACDYLIKPIRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGGDRQQKQSEDADYSSSAN
EGSWKNSKRRKDEEEEADERDDTSTLKKPRVVWSVELHQQFVAAVHQLGIDKAVPKKILE
LMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQSGMGNSFINPQEATYGPLSSLNGLDLQ
TLAAAGQIPAQSLATLQAAGLGRSTAKPRMPMPIVDQRNLFSFENPKLRFGEGQQQHLNN
GKQINLLHGIPTTMEPKQLADLHHSAQSLGSMNMQLNAHGDQSGQSGSLLMQMSQQQSRG
QILNETTSSQVPRLPSSIGQPIVTNAIASGVLARNGLAENGRGTGFNPVSQSSPTLNFPL
NTTAELTATSFALGSAPGVPSLTSKGTFPEDISSEMKGPGGFIMPSYDIFSELQHHRSHD
WELQNVGMAFNGSQQSNSLQSNVDVASSVLAHQGFSSSQSNGQGRNISAVSKPIFSAGDA
TSHVNAQSLGQPLNTFFAENLVRVKTERVPDANLQTTLFNEQFGQEDLMSALLKQQQQAG
IGPAEIEFDFDGYSLDNIPV
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgttgaatctcggttactgtaaaggatcaatgtcaacggctagttctggtggtgtttca
gatcagttcccggcagggttacgtgtgttggttgttgatgatgatccaacatgtcttgtg
atcttggagaagatgcttaggacctgcctttatgaagtcacaaagtgtaaccgagcagag
attgcgttgtctttacttcgagagaacagaaacgggtacgatattgttataagtgatgtc
cacatgccagatatggatggatttaaacttctcgagcttattgggctagagatggatctg
cctgttatcatgatgtcagctgatgatgggaaaaatgtggtcatgaaaggtgtaactcat
ggtgcttgtgattacctgattaaaccgattcgcattgaggcacttaagaacatatggcag
cacgtggttcggaagagaaagaacgagtggaaggatttggagcaatcagggagtgtagaa
gagggaggagataggcagcagaaacaatctgaagatgcagattactcatcctcagcaaac
gaaggaagttggaaaaactcaaagaggagaaaagatgaggaagaagaagcagatgagagg
gatgatacatccacattaaagaaaccacgtgtggtttggtcagttgaacttcaccaacag
tttgttgcagcagttcatcaactaggaattgacaaggcagttcccaagaaaattctggag
ttgatgaatgttcctgggctcaccagagaaaatgttgccagccacctccagaaatatcgc
ttgtatcttagaaggttaagtggggtttcacagcaccagagcggtatgggcaactctttt
atcaacccgcaagaagcaacatatggtccattgtcctcgcttaatgggcttgaccttcaa
actcttgctgctgctggtcaaatccctgcacaaagccttgccacactgcaagcagccgga
cttggtcgatcaacagcaaagcctagaatgcccatgccaattgttgatcagaggaacctt
ttcagctttgaaaacccaaaattaagatttggggaggggcaacagcaacatttgaacaat
ggtaagcaaataaacttacttcatggaatcccaaccacaatggagccgaagcagctagcc
gacttgcaccattcagctcagtcccttgggagcatgaatatgcaactcaatgcccatgga
gaccagagtggtcagagtggttctttgctgatgcagatgtctcaacagcagtctaggggc
cagatactaaatgaaactaccagcagccaagttcccagactcccatcgtccatagggcag
cctattgtaactaatgcaattgccagtggggtcttggcaagaaatggattagctgaaaat
ggcagaggaacaggattcaatccagtttcacaatcatctccaacgttgaatttccccttg
aacaccacagctgaattgacagccactagttttgctcttggaagtgctcctggggtgcct
agtctcacatccaaggggacatttcccgaagatattagctcagaaatgaaaggacctgga
ggattcatcatgccaagttatgatatttttagtgaattgcaacaccatagatcccatgat
tgggagttgcagaatgtaggcatggccttcaatggttctcagcaatccaactctctgcaa
agcaatgtcgatgtggcatcatcagttttagctcatcagggcttctcttctagccaaagt
aatggacagggcaggaatatatctgctgtcagcaagccaatattttcagcaggagatgca
acgagccatgtgaatgcacaaagtctcggacaacctctcaacaccttttttgccgagaat
ttagtgagagttaagactgaaagagtccctgatgcaaaccttcaaactaccctctttaat
gaacagtttggtcaggaagatctcatgagtgcgcttctcaaacaacagcagcaggcaggc
attggaccagctgaaattgaattcgacttcgatgggtattccctggataatattcctgtg
tag
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