Populus trichocarpa (black cottonwood): 7477210
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Entry
7477210 CDS
T01077
Name
(RefSeq) transcription factor HY5-like isoform X2
KO
K16241
transcription factor HY5
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
7477210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7477210
Transcription factors [BR:
pop03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
Plant bZIP factors
7477210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
bZIP_Maf
Phlebovirus_NSM
Motif
Other DBs
NCBI-GeneID:
7477210
NCBI-ProteinID:
XP_002314340
UniProt:
B9HXC4
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All DBs
Position
10:391197..394362
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AA seq
218 aa
AA seq
DB search
MDIGESNNKYPHDHKKQLLDDDDDDDDDDDDHQVEGTSATATSSSSSSWRIRRSTGSTSD
NLISHHKNKLVDHEDSDEDLFTVPDVEARPPAEAAAAAAGNNTTTYNNKNINSNNPEVQS
AAAAPAATGSNKRHRGRNPVDKEYRRLKRLLRNRVSAQQARERKKVYVNDLESRAKELQE
INTKLEEKISTLTNENTMLRKVLMNTRPKVDESMEQKQ
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggatattggtgaatccaacaacaagtaccctcatgatcataagaagcaattacttgat
gacgatgacgacgacgacgacgacgacgacgaccatcaggtggagggcactagtgctacc
gctacctcttcgtcttcctcttcttggaggatcaggagaagtactggtagtacaagtgac
aatctcatttcacaccacaaaaacaaattagtagatcatgaagacagtgatgaagatctt
ttcacggttccggatgtagaagctcgaccaccagcggaggctgctgctgctgctgctggt
aataatactactacttacaataataagaacattaattctaataatccagaggttcaatcc
gccgcagcagcaccagctgcaacagggagtaataaacgccatagaggacgaaaccctgtt
gacaaagaatatagaaggctcaagagattgctaaggaacagggtctcagcccaacaagct
cgagaaagaaagaaggtttacgtcaatgacttggaatcaagagccaaagaattgcaggaa
attaataccaaattagaggagaagatctccacattgaccaatgaaaacaccatgcttcgg
aaggtcctcatgaataccaggcctaaggttgatgaaagcatggagcaaaagcagtaa
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