Populus trichocarpa (black cottonwood): 7477219
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Entry
7477219 CDS
T01077
Name
(RefSeq) phospholipase D zeta 1 isoform X2
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00564
Glycerophospholipid metabolism
pop00565
Ether lipid metabolism
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
7477219
00565 Ether lipid metabolism
7477219
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
7477219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7477219
Enzymes [BR:
pop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
7477219
Membrane trafficking [BR:
pop04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
7477219
Endosome - Golgi transport
Others
Others
7477219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc
PLDc_2
PH
Motif
Other DBs
NCBI-GeneID:
7477219
NCBI-ProteinID:
XP_002315486
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Position
10:complement(573874..585693)
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AA seq
1123 aa
AA seq
DB search
MASSEQLMGGGSVGGGGGGGGGPRYVKMQSEPSTPLQPQSSSIISSFFSFRQGSTPESCR
IFDELPKGTIVSVSRPDLSDISPVQLSYTIEVQYKQFKWTLLKKAAQVFYLHFALKKRLF
FEEIQEKQEQVKDWLQNLGIGEHTPMVQDDDDADDETVPLHHDEIAKNRDVPSSAALPVI
RPALGKQHSMSDDAKVAMQQYLNHFLGNMDIVNSREVCKFLEVSKLSFLPEYGPKLKEEY
VMVKHLPQIVKNDDSRKCACCCFSCCNDNWQKVWAVLKPGFLALLADPFATKPLDIIVFD
VLPTSDGSGEGRVSLAAEIKERNPLRHSFKVTCGNRSIDLRSKSGARVKDWVAAINDAGL
RPPEGWCHPHRFGSFAPPRGLSDDGSQAQWFIDGRAAFDAIASSIEDAKSEIFICGWWLC
PELYLRRPFRDHASSRLDSLLEIKAKQGIQIYILLYKEVALALKINSVYSKRKLLSIHEN
VRVLRSPDHFSTGVYLWSHHEKLVIVDHQVCFIGGLDLCFGRYDTCEHRVGDCPPQEWPG
KDYYNPRESEPNSWEDMMKDELDRGKYPRMPWHDVHCALWGPPCRDVARHFVQRWNFAKR
NKAPYEEAIPLLMPQQHMVIPHYRGQNKEKEVERRDIEDNVKGIKRQDSFSSGSSLQDIP
LLLPQEADGPDGSGVGPKRNGLESTPGRSHPHAFRKSKIESVVPDMPMTSFVDDHDSLNL
HVKMSPDLAAEPGTKTSDLEWWESQERVDQIGSVDESGQVGSRVSCHCQVIRSVSQWSAG
TSQIEESIHCAYCSLIEKAENFVYIENQFFISGLSGDDIIQNRVLEALYQRIMRAFNDKK
CFRVIIVIPLLPGFQGGVDDGGAASVRAIMHWQYRTICRGQNSVLHNLYDLLGPKTQDYI
SFYGLRAYGQLFNGGPVVTSQVYVHSKIMIVDDRATLIGSANINDRSLLGSRDSEIGVLI
EDKEFVDSLMGGKPWKAGKFALSLRLSLWSEHLGLHAKEIHKVIDPVIESTYKDRWMSTA
KTNTMIYQDVFSCVPSDLIHTRAALRQSTAFWKDRLGHTTIDLGIAPQKLESYQNGDIKN
TDPLERLKSVRGHLVSFPLDFMCKEDLRPVFNESEYYASQVFY
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atggcatcatcagagcaattaatgggaggtggaagtgtcggaggtggtggtggtggtggt
ggtggtccccgatacgtaaaaatgcaatcagagccatcaacgccgttacaaccacaatca
tcatcaataatatcgtccttcttctctttccgtcaaggttcgacaccggaatcctgtcgg
attttcgatgaattaccgaaaggcactatcgtctccgtatctagacccgacctcagcgat
attagtcctgttcaattatcttacactatcgaagttcaatacaaacagttcaagtggaca
ctgttgaagaaagcggctcaagtgttttatttacattttgcattgaagaaacgattgttt
ttcgaggaaattcaggagaagcaagagcaggttaaagattggcttcaaaatctaggaata
ggagaacatacgcccatggtgcaagatgatgatgatgctgatgatgagaccgttcctttg
catcatgatgaaattgccaaaaacagggatgttccatcaagtgctgctttaccagttatt
cgtccagcattgggaaagcagcattcgatgtcggacgatgcaaaggttgcaatgcaacaa
tatttaaatcactttttagggaacatggatattgttaactccagagaggtttgcaagttt
ttggaggtctcgaaattgtcctttttaccagaatatggccctaagctgaaagaagaatat
gttatggtgaagcatctaccacaaatagtgaagaatgatgattccaggaaatgtgcttgc
tgttgctttagttgctgtaatgacaactggcagaaggtgtgggctgttttgaaaccagga
ttcttggcacttctggctgatccttttgctaccaaacctttggatataattgtttttgat
gtattacctacttcagatggaagtggtgaaggccgagtgtcattagcagcagaaataaag
gagaggaatcccttacggcacagttttaaggtcacatgtggaaacagaagcatagacttg
agatctaaaagtggtgccagagttaaagattgggttgctgcaattaatgatgctggactt
aggcctcctgagggttggtgtcatcctcatcgctttggctcttttgctcctcctaggggt
ttgtctgacgatggtagtcaggctcagtggtttatagatggtagggcagcttttgatgct
attgcttcatcaattgaggatgctaaatctgagatatttatttgtgggtggtggctgtgc
ccagaactttatctaaggcgtccttttcgtgatcatgcctcttctagacttgattctttg
ctggaaattaaagctaaacaagggattcagatatatattcttctctataaagaggtggct
cttgctctgaaaataaatagtgtgtatagcaagagaaagcttcttagtattcatgagaat
gtgagggtactgcggtctcctgaccacttttcaacaggtgtttacctttggtcccaccat
gaaaagcttgtcatcgtggatcaccaggtttgctttattggaggactggacctgtgcttt
ggccgttatgacacatgtgaacacagagtgggagactgccctcctcaagaatggccagga
aaggattattataacccaagggaatctgaaccaaattcatgggaagatatgatgaaagat
gaactggatcgtggcaaatatcctcgaatgccttggcatgatgtccattgtgctctttgg
ggaccgccttgtcgtgatgtagctaggcactttgtccagcgttggaactttgccaagaga
aataaagctccatatgaggaagcaattcctctacttatgccccagcagcacatggttatc
ccacactatagggggcaaaacaaagagaaggaagttgaaagaagagatattgaagataat
gtaaaaggcattaaaaggcaggattcgttttcctctggttcatctttacaagacatccct
cttcttttgcctcaggaagctgatgggcctgatggctctggtgtaggcccaaaacgaaat
gggctggagtctacccctggaagaagccacccacatgctttccggaaatccaaaattgaa
tcagttgttccagacatgccaatgacaagctttgtagatgatcacgattccttgaatctt
catgtgaaaatgtctccagatttagcagcggagcctggcaccaaaacttctgacttggaa
tggtgggaatcacaagaaagggttgatcagattggttctgtggatgaaagtgggcaagtt
ggttctcgtgtttcttgtcattgtcaggtcataaggagtgtgagtcagtggtctgctgga
acaagccaaattgaagagagcattcactgtgcttattgttctcttatcgagaaagcggag
aactttgtctacatcgagaatcaatttttcatatcaggtctttcaggagatgatattata
cagaatcgtgtgttagaagcattgtatcagcgtattatgcgagcatttaacgataagaag
tgtttcagggttattattgtcataccactgcttccaggattccagggtggtgtagatgat
ggtggtgcagcatctgtcagagccataatgcattggcaatatcgaactatttgcagagga
caaaattcagtattgcacaacttatatgatcttcttggtccgaaaactcaagattacatt
tctttctatggccttagagcttatggccaactttttaatggtggtcctgtggtcaccagt
caggtgtatgtccatagtaaaataatgatagttgatgaccgtgcaaccttgattggatca
gctaatattaatgacaggagtttgcttgggtcacgagattctgagattggggtacttatc
gaagacaaggaatttgtggattcattaatgggagggaagccctggaaggctggaaaattt
gctcttagtctccgcctttcattgtggtctgaacaccttggtcttcatgccaaagagatc
cataaagtgattgacccagtaattgagtcgacttacaaagacagatggatgtcaactgca
aagacaaataccatgatctatcaggatgtcttttcttgtgtgccaagtgatcttatacac
accagagccgcactcagacaaagtacggcgttctggaaggataggcttggccataccacc
atcgatctagggatagcccctcaaaagcttgagtcttaccaaaatggagacataaaaaac
accgatccgctggagagattaaagtcggtgcgggggcatcttgtttctttccctctggac
ttcatgtgcaaggaagacttgagacctgtgttcaatgagagcgagtattatgcatcccaa
gttttttattag
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