Populus trichocarpa (black cottonwood): 7477424
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Entry
7477424 CDS
T01077
Name
(RefSeq) ribulose bisphosphate carboxylase small subunit, chloroplastic isoform X1
KO
K01602
ribulose-bisphosphate carboxylase small chain [EC:
4.1.1.39
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00630
Glyoxylate and dicarboxylate metabolism
pop00710
Carbon fixation by Calvin cycle
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop01200
Carbon metabolism
Module
pop_M00165
Reductive pentose phosphate cycle (Calvin cycle)
pop_M00532
Photorespiration
pop_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
7477424
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
7477424
Enzymes [BR:
pop01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
7477424
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Motif
Pfam:
RuBisCO_small
RbcS
CSS_CxxC
Motif
Other DBs
NCBI-GeneID:
7477424
NCBI-ProteinID:
XP_002305162
UniProt:
A9PG69
A9PFS6
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Position
4:complement(8647272..8648675)
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AA seq
182 aa
AA seq
DB search
MASSSMISSAAVATVNRTPVQANMVAPFNGLKSAAAFPVSTRKANDITSIASNGGRVQCM
QVWPPTGLKKFETLSYLPDLTEEELAKEIDYLLRSKWVPCLEFELEKGWVYREHHSSPGY
YDGRYWTMWKLPMFGCTEASQVLLELEEAKKAYPNAFIRIIGFDNTRQVQCISFIAAKPK
GV
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcctctatgatctcatcggcagccgttgccaccgtcaaccgcaccccggta
caagccaacatggtggcaccattcaatggtctcaagtctgccgcagctttcccagtcagt
accagaaaggctaatgacattacttccattgcaagcaatggtggacgagttcaatgcatg
caggtgtggccaccaactggattgaagaagttcgagactctttcttaccttccagatctc
acagaggaggaattggccaaggaaattgattaccttcttcgctcgaagtgggttccttgc
ttggaattcgagttggagaaaggttgggtctaccgtgagcaccacagctcaccagggtac
tatgatggacgctactggactatgtggaagctacccatgtttggatgcactgaggcatct
caagtgttgcttgagcttgaggaggcaaagaaagcttaccctaacgcctttatccgtata
atcggattcgacaacacgcgtcaagtgcagtgcatcagctttattgccgccaagccaaaa
ggtgtctaa
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