Populus trichocarpa (black cottonwood): 7477634
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Entry
7477634 CDS
T01077
Name
(RefSeq) 26S proteasome regulatory subunit S10B homolog B
KO
K03064
26S proteasome regulatory subunit T4
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
7477634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pop03051
]
7477634
Proteasome [BR:
pop03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
7477634
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_5
AAA_2
RuvB_N
AAA_22
nSTAND3
PRS7_OB
DUF815
Prot_ATP_ID_OB_N
AAA_7
TIP49
IstB_IS21
Parvo_NS1
AAA_14
RNA_helicase
AAA_33
Mg_chelatase
AAA_18
Sigma54_activat
AAA_28
AAA_3
TsaE
AAA_24
AAA_lid_PRS2_C
NPHP3_N
NACHT
bpMoxR
AAA_11
ABC_tran
Csa3_N
ATPase
AAA_25
ATPase_2
ResIII
PhoH
AAA_30
NB-ARC
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
7477634
NCBI-ProteinID:
XP_002307679
UniProt:
B9H4F7
LinkDB
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Position
5:complement(23081250..23084297)
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AA seq
402 aa
AA seq
DB search
MATINNDGEDAARRRNAEAEYRKKLLHHKELESRVRSARENLKAAKKEFNKTEDDLKSLQ
SVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRAL
PREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVL
LYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIF
MDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLR
PGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGDIDYEAVVKLAEGFNGADLRNVCTEAG
MSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYNADFGKD
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccataaacaacgacggagaagacgcagcacgacgtcgcaatgcagaggcggag
taccgcaaaaagttactccaccacaaagagctcgaatccagagttcgatctgcgagggag
aatttgaaagctgcaaagaaagaatttaacaaaaccgaagatgatttgaagtctcttcaa
agtgttggtcagattataggagaagttcttcgacctcttgacaacgaacgcttgattgtt
aaagctagcagtggacctcggtatgtggtaggctgccgtagtaaagtggataaggaaaaa
ctgacttcaggaaccagagtggttcttgatatgactacgcttacgattatgcgtgctctt
ccgcgcgaagttgatccagttgtttataacatgctgcacgaagatcctggtaatgtgagt
tactcggctgttggtggtttatctgatcagattagggaactaagggaatccattgagtta
cctctgatgaaccctgagcttttccttagggtggggattaaacctcccaagggtgtcctt
ctttatggacctcctggtactgggaagacattgttggctagggccattgcgagcaacata
gatgccaactttttgaaggttgtttcaagtgccatcattgacaaatacataggagaaagt
gctaggttgatacgagaaatgtttggatatgcacgtgatcaccaaccctgcatcattttc
atggatgagatcgatgcaattggtggacgccgttttagtgagggaacaagtgctgatcgt
gaaatccaaagaacattgatggagttgcttaaccaacttgatggatttgatcagcttggg
aaggttaaaatgataatggcaacgaaccgccctgatgttcttgaccctgcacttcttcgt
ccgggaagattagacagaaagatagagattccactaccaaatgaacagtcaagaatggaa
atcctaaagatccatgctgctggaattgccaagcatggagatatagattatgaggctgtt
gtgaaacttgcagagggtttcaatggagctgatcttcgtaatgtttgcacggaagcgggg
atgtcagcaatccgtgcagaacgcgattatgtcatccatgaagattttatgaaggctgta
cggaagcttaatgaagcaaagaaactcgagtctagcgcacattataatgctgattttggc
aaagactga
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