Populus trichocarpa (black cottonwood): 7477660
Help
Entry
7477660 CDS
T01077
Name
(RefSeq) auxin response factor 5
KO
K14486
auxin response factor
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
7477660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
PB1
Motif
Other DBs
NCBI-GeneID:
7477660
NCBI-ProteinID:
XP_024457113
LinkDB
All DBs
Position
5:complement(23446443..23452839)
Genome browser
AA seq
944 aa
AA seq
DB search
MGSVEEKIKTGGLANGAQTNLLEEMKLLKEFQDQSGIRKAINSELWYACAGPLVSLPQVG
SLVYYFPQGHSEQVAVSTRRSATSQIPNYPNLPSQLLCQVHNVTLHADKDTDEIYAQMSL
QPVNTEKDVFPIPDFGLRPSKHPSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTM
QPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLKAGDSVLFIRDEKSQ
LMVGVRRANRQQTTLPSSVLSADSMHIGVLAAAAHATANRSPFTIFYNPRACPSDFVIPL
IKFRKAVFGTQVSVGMRFGMMFETEESGKRRYMGTIVGISDLDPLRWPGSKWRNLQVEWD
EPGCSDKQNRVSSWEIETPESLFIFPSLTSGLKRPLQSGFLGDSEWGSLVKKPLSWLPGS
GNANLPYASMSNICSEQLINMLMKPHPINYPGICGAALPEVSAAKVASLDVKNMQATINQ
MPQLNQSGVTSVENQNYSQICLDQSDAIISSSLKINVAGKSFSSSEVENQASVGVGERKL
KAETEHLPDQLSQLTSTGECIVQKPSSCPMTQQNATNHLAFQNQNQGHSQLQTNLWPAQA
FPESSLLNSQQILSPLADATAPNCSLPFLDADEWISHPMSLAGMYRSGPLSMFGSQDTSV
VFPEAINPSLPFMNQDVWDHQMSNSRFLSQANQLISSTQQEPCTLNSGAVKDLSDESNDQ
SGIYGSLNFDASNGGGSVVDPSVSSAILDEFCTLKDADLQNASDCLVGNLSSSQDVQSQI
TSASLADSQAFSRQDFPDNSGGTSSSNVDFDNSNMLQNSSWQQVAPRVRTYTKVQKTGSV
GRSIDVSSFKNYEELCSAIECMFGLDGLLNNPKRSGWKLVYVDYENDVLLIGDDPWEEFV
GCVRCIRILSPSEVQQMSEEGMKLLNSANIQGTNAPITEGSHAR
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggggtctgtggaagagaaaatcaagacaggagggcttgctaatggagctcaaacaaat
cttctcgaggaaatgaagttgttgaaagaatttcaagatcagtctggaatacggaaggca
atcaactcggagctgtggtacgcttgtgcaggcccactagtttccttgcctcaggttgga
agtctggtgtattattttcctcaaggacacagtgagcaggtggcagtttccacgagaaga
tcagctacttcacagatccccaactacccaaatctgccttctcagttattgtgccaagtt
cacaatgtcaccctacatgcagacaaagatacagatgaaatctatgctcaaatgagtctt
caaccagtgaacactgaaaaagatgtcttccctataccagattttgggctaaggcccagc
aagcatccaagtgaatttttctgcaaaactttgactgctagcgatacaagtacacacggt
ggcttctcagtgccacgcagggcagcagaaaagctcttccctccactggattacacaatg
caaccgccaactcaggagcttgttgtaagggacttgcatgataatacctggacttttcgc
catatataccgcgggcagccaaaacgacaccttcttacaactgggtggagtttatttgtg
ggttcaaaaaggcttaaagcaggtgattctgttttgttcatcagggatgaaaagtcacag
ttaatggtgggtgtgaggcgtgcaaaccgtcaacaaacaacattaccttcatcagttcta
tctgctgatagcatgcacattggtgtccttgctgctgcagctcatgctactgccaatcga
agcccattcaccattttttacaatccaagggcatgcccttcagactttgtcattcctttg
attaaattccggaaagctgtatttggaactcaagtctcagtcggtatgaggtttggaatg
atgtttgagacagaagagtcaggaaaacgcagatatatgggcacaatagttggtatcagt
gacttggatccactgaggtggcctggttctaagtggcggaatcttcaggtggagtgggat
gagccagggtgttctgataagcagaacagggttagttcatgggaaattgagactcccgaa
agtctctttatttttccttctctgacttcaggtctcaaacgacccttgcagtctggattt
ttaggagattctgagtgggggagtttggtaaaaaagcccctttcatggcttcctggcagt
ggaaatgcaaatctcccatatgcttcaatgtcaaacatatgttctgaacaactgattaac
atgctaatgaaacctcatcctattaactatcctggaatctgtggagctgcactaccagaa
gtttctgccgcgaaggtggcttcattagatgttaagaacatgcaggcaacaattaatcag
atgcctcagctaaaccagtcaggagttacgtctgtagaaaaccagaattattcacagatc
tgtctagaccaatctgatgccataatctcatcttcattgaaaataaatgtagctgggaag
tcattttcttcaagcgaagttgaaaatcaagcatcagttggagttggtgaaagaaaatta
aaggcagaaactgagcatttgccagatcagttaagccagctaacctcaacaggagaatgc
attgtgcagaaaccatcatcgtgtcctatgacccagcagaatgccacaaatcatctagcg
ttccaaaaccagaatcagggccactcacaattacaaaccaacctctggcctgcacaggca
tttccagaatcatcgctacttaattcccaacagatcctttcacctcttgctgatgctact
gcacctaactgctcactaccgtttctagatgcagatgaatggatatcacatcccatgtct
cttgctgggatgtatagatcggggccactgtctatgtttggatcacaggacacatcagtt
gtgttcccggaagcaattaatccctctttaccttttatgaatcaagatgtgtgggatcat
cagatgagcaattcaagatttctatcccaagcaaaccaattgatttcttcgactcagcaa
gagccttgtaccttaaactcaggtgcagtgaaggatttatctgatgagagcaatgatcaa
agtgggatttatggttctctcaactttgacgccagcaatgggggtggttctgtggtcgat
ccttctgtctcaagtgctatactagatgagttctgcacattaaaggatgctgatttgcag
aatgcttcggattgtctagttggcaacctcagctcaagccaggatgttcagtctcagatt
acctcagcaagcctagcagattcccaagctttctcacggcaagactttcctgacaactca
ggtggtacatcttccagcaacgttgattttgataatagcaatatgctccagaatagctca
tggcagcaagttgccccacgtgtgcgcacatataccaaggttcagaagacagggtctgtt
ggcaggtcaattgatgtctcgagttttaaaaattatgaagaactatgctccgctattgaa
tgcatgtttggacttgacgggcttctaaataatcctaaacgttctgggtggaaattagta
tacgtggactacgagaatgacgttctactcattggtgatgatccttgggaggaatttgtc
ggctgtgtccgttgcataaggattctgtcaccttcagaagttcagcagatgagtgaagag
ggaatgaagcttcttaacagcgctaacatccaagggaccaatgcacccatcaccgagggt
agccatgctcgataa
DBGET
integrated database retrieval system