KEGG   Populus trichocarpa (black cottonwood): 7477768
Entry
7477768           CDS       T01077                                 
Name
(RefSeq) U2 small nuclear ribonucleoprotein A'
  KO
K11092  U2 small nuclear ribonucleoprotein A'
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    7477768
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pop03041]
    7477768
Spliceosome [BR:pop03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    7477768
 Complex B
    7477768
 Complex C
   U2 SnRNP specific factors
    7477768
SSDB
Motif
Pfam: LRR_9 LRR_4 LRR_8 DHU1_N LRR_14 LRR_R13L1-DRL21
Other DBs
NCBI-GeneID: 7477768
NCBI-ProteinID: XP_002299368
UniProt: B9GMX5
LinkDB
Position
1:complement(5420480..5425014)
AA seq 284 aa
MVRLTADLVWKSPHFFNAIKERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENM
PYLNRLGTLIINNNRITRINPNIGEYLPKLHTLVLINNRLVNLAEIDPLASLPKLHFLSL
LDNNITKKPNYRLYVIHKLKSLRVLDFKKVKGKERAEAEHLFASKEVEEEARRESVKTFT
PGEVPNVLEGAEEQQAPKVVAPTPDQIIAIKAAIVNSQTLEEVARLEKALNSGQLPADLK
ILDGTGSNSVKEQDDKMATDNQNEAEPNNLEEQKDNEATPMEQE
NT seq 855 nt   +upstreamnt  +downstreamnt
atggtgagactgacagccgacttggtttggaaaagccctcatttcttcaatgccatcaag
gagcgcgaattagatcttcgaggtaacaagattcctgtaatcgaaaacctgggtgctact
gaggaccaatttgataccatcgatttgtctgacaacgagattgtcaagcttgaaaacatg
ccctatcttaatcggctgggcactttgataatcaacaacaacagaattacccgtatcaat
cctaacattggagagtacttgccaaaacttcacacgttagttcttataaacaataggctt
gtcaatttggcagagatcgatcctcttgcttctcttccaaagctgcatttccttagtctt
ttggataataacatcaccaaaaagccaaattataggctctatgtgattcacaaactaaaa
tcactccgggttcttgattttaagaaagtcaaaggcaaggagagagcggaagcagaacat
ttgtttgcatccaaagaggttgaagaagaggctagaagggaatctgtcaagacattcact
ccaggtgaggttccaaatgttttagaaggtgccgaggaacaacaggctcctaaagtggtt
gcccccacaccagatcagattatagcaatcaaggctgccattgtcaattcccagactctt
gaagaagttgcaagacttgagaaggcattgaactcaggtcaacttcctgcagatcttaaa
attttggatggtactgggtcaaatagtgtcaaagaacaagatgacaaaatggctactgat
aatcaaaatgaggccgaaccaaacaatttggaggaacagaaggataatgaagccacgcct
atggaacaggaataa

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