Populus trichocarpa (black cottonwood): 7477784
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Entry
7477784 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7477784 isoform X1
KO
K11799
DDB1- and CUL4-associated factor 4
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7477784
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
7477784
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Motif
Other DBs
NCBI-GeneID:
7477784
NCBI-ProteinID:
XP_024452430
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Position
1:complement(5676817..5686543)
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AA seq
505 aa
AA seq
DB search
MPQELPGFYYDKEKNRYFPLKGPIPGSSRSSSSSNKAKKPSTNNTQESNFCRRTGVRISQ
LLQGRELNGNVITSSKGKCDFVEEFLKIQASKPVVWKYRSTEKIADSAMDQIHIDIHTAE
GQTEANVLITGGVNGSLSLFEVGKVGEHNHGVECIPDRMWPVIEEKRAECGKDPGCIWRP
PGASLHMSSNISCIKMCGKHSPIQRALITTLGSETSGGSVYILNLVEPVDFDSSSAIGEM
MHKTADFNCTIWTADCSYNSNRAVIGTNVGAALVNLETGMTSWVCRSKSDVLSQQLDPSG
NVVLCGLRNGAILTVDVREKQERVSDRFIRHRIPYSSLGRQGPSSSKQWFEVKGNIYPSR
TILMPSSVCSLVSLQSYDQYFLASSMDGLIKLYDQRMTKRGAVQSYEGHVNSHTRLQLGV
DQSERFVMAGGEDCSLRLWSIKSGKLLFEEKISDSILSTVCWKRSERLVKTLNEGKSYEE
CLSRQNHSWGTWFGSQEGLFYISWS
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgccacaagaacttccggggttttattatgataaagagaagaacaggtattttcctctc
aaaggcccaattccgggttcctctcgctcttcttcttcttcaaacaaagctaaaaaacca
tctacaaacaatacccaggaatccaacttttgtaggagaactggagtaagaatatcccaa
ctgcttcagggtagggagttgaatggtaatgtaataacttccagcaaagggaagtgtgac
ttcgtggaggaattcctaaagatacaagcatccaaaccagtggtttggaagtaccggtca
actgaaaagatagccgatagtgccatggaccaaatacatattgatattcacacagcagaa
ggtcaaactgaagcaaatgttctaataacaggcggtgtaaatggctctctgagtcttttt
gaagtaggaaaagttggagaacataatcatggggtagaatgcattccagatcgtatgtgg
cctgtcattgaagagaagagagcagagtgtggtaaagaccctgggtgtatctggagacct
ccaggagcttctctacatatgtcttcaaatatatcttgtataaaaatgtgtggaaagcac
tctcccatccagcgggcattgataactactcttggatccgagacatccggaggatctgtt
tatattcttaaccttgtcgaaccagtagattttgattcaagttctgctataggtgaaatg
atgcacaaaactgctgatttcaattgcaccatttggactgcagattgcagttataactcg
aatcgggcagtgattggaacaaatgtaggagctgccctggtcaatttggaaactggaatg
acatcatgggtgtgtagaagcaaaagtgatgttttgtctcaacagcttgatccatcgggg
aacgttgttttatgtgggctaagaaatggagcaattttgaccgttgatgttcgtgaaaaa
caagagagggtttcagatagatttattaggcatagaataccttattcatcactgggcaga
cagggtccaagttctagcaaacaatggtttgaggtcaaaggaaacatatacccttctcgt
actattttgatgccttcatctgtatgcagtttggtatcgcttcagtcttacgaccagtac
ttcttggctagctctatggatggattgattaagctttatgatcaacgcatgactaagaga
ggtgctgtgcaatcttatgaaggacatgtgaactctcatactcgtttacagcttggagta
gaccaatctgagagatttgttatggcaggaggagaggattgcagtttgcgactttggagc
atcaagtccggcaagctgcttttcgaggaaaaaatttctgattcaattctctcaactgtg
tgttggaagagatctgaaagactcgtgaagacattgaatgaaggaaaaagctatgaagag
tgcttatctaggcagaaccatagttgggggacatggtttggatcacaggaaggactgttc
tacattagttggtcatga
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