KEGG   Populus trichocarpa (black cottonwood): 7478022
Entry
7478022           CDS       T01077                                 
Name
(RefSeq) uncharacterized protein LOC7478022
  KO
K14721  DNA-directed RNA polymerase III subunit RPC5
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    7478022
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pop03021]
    7478022
Transcription machinery [BR:pop03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Pol III specific subunits
     7478022
SSDB
Motif
Pfam: RPC5 DUF6374
Other DBs
NCBI-GeneID: 7478022
NCBI-ProteinID: XP_024461377
LinkDB
Position
7:complement(2178949..2189017)
AA seq 664 aa
MDLDGLDEPSKVRKPPSRFAPTSKKPQPKSKPKPKPEPQESVPVGPKPDPSVSNTAEDAK
PKIDDTLSKTETGVSNGNVKMEIDAKEERGAAVKENDLMDVDKEEDEDDVVVREIDVYYT
PSVDPNTQLYVMQYPLRPCWRPYELDERCKEVRVKPESTEVEVDLSIDDTKNYDPDIASR
LNMKKQTLSSSWSPPPATGYAVGVLIGNKLHLNPIHAVVQLRPSMDYLSSGNSKGKKNAT
SGEDSNEGKPLGLPKKQSKQMSSGNEQKPDVEESWIPLKYHGSKSDLSSRYLQNMVAPES
STIEFAMNPYDYMSSLCPGISNNNIKLNGPSRRVLLSLPLEERIKRLFLEGPPIHRFAAL
RHLIPNDSIEDLLIVLQEYGQLVQGLWVPKTSLLFPNPKPTEKVKLAARDYILLLFSKSL
VVTPSELNVPMKPLILKSFLNIFAVERPSFKDWKFKENVDTLFVELYPDIVRKQEQAWEV
MGKNISAAFDRAGKSVSKNVITKPKKTMTDETREALRKALPKVLQTHKVCSFQMICQGLR
QLAISQSTLPKADPRIAVAAASGAEAPPEELQEVISEVATNIHGFYVLKSSPEHPDFDPL
RKVVIGLFLARGPNANIKKSEVQAAARLELKREPSNSEYIKVMTDLCESKGSAWVLKSGD
GKPS
NT seq 1995 nt   +upstreamnt  +downstreamnt
atggacctggacggcctagacgaaccgagcaaggtacgaaaaccacccagcagattcgcg
ccaacttcaaagaaacctcaaccaaaatcaaaacctaaacctaaacccgaacctcaggaa
tcagtaccggtgggaccaaaacccgacccttcagtttctaacacagccgaagatgctaaa
cctaaaattgatgatacgctttcgaagacggaaacgggggtttccaatggtaatgtgaag
atggaaattgatgctaaagaagagagaggagcagctgtaaaggaaaatgatctaatggat
gttgataaagaagaggatgaggatgatgtggttgttcgcgaaattgatgtttactacact
ccgtccgtcgaccccaacactcagttatatgtaatgcaatatccattgaggccgtgttgg
agaccgtatgaattggatgaaagatgtaaagaggttagagtgaaacctgaaagcaccgaa
gtggaggttgatttgtctattgatgatactaaaaactatgaccctgatattgctagcaga
ttgaatatgaaaaagcagactttgtcgtcctcatggtcgccgcctcctgctactgggtat
gctgttggggttcttataggtaataagttacacctgaatcctattcatgcagtggtgcag
cttcggccatcaatggactatttaagttctggtaattctaaagggaaaaaaaatgccaca
agtggagaagattccaatgaggggaaacccttgggtctaccaaagaagcagagcaagcag
atgagttcaggaaatgagcaaaagccagatgttgaggagtcttggattcctctgaagtac
catggctcaaaaagtgatttatcttccagatatctacagaacatggtggccccagaaagt
tctaccattgagtttgcaatgaacccgtatgactacatgagctccttgtgtcctgggata
tcaaacaacaatattaaactcaatggtccttcaagaagggttttgctttcactgcctctg
gaagaacgaattaagaggctgtttttggagggacctccaattcatcggtttgctgctctt
aggcatcttattccaaatgactccattgaagatctcttaatagttcttcaggagtatggg
caattagtgcaaggactatgggtgccaaaaacgagtttactgtttcccaacccaaagcca
actgaaaaggttaaacttgcagctagagattacatacttcttttatttagcaagagtttg
gtggtcaccccttcagaacttaatgtcccaatgaagcctctgattctgaagagcttcctg
aatatatttgctgttgaaaggccttcctttaaggattggaagttcaaagaaaatgtggat
acattgtttgtagaactgtacccagacattgttagaaagcaagaacaagcttgggaagtc
atgggaaaaaacatttctgctgcttttgatcgagctggaaaaagtgtgtccaagaatgtg
ataacaaagccgaagaaaaccatgacagatgaaactcgagaagctctgcggaaggccttg
ccaaaagttctccaaactcacaaggtttgcagttttcaaatgatttgccaaggtttgcga
cagttggccatctctcagtctactcttccaaaggcagatcctagaattgcagtagctgca
gcctctggtgctgaagctcctccagaggaacttcaagaagtcataagtgaagtcgcaact
aatattcatggcttttatgttttgaagtcttcaccagaacacccagattttgatccattg
agaaaagttgtaattgggctttttctagcaagaggacctaatgcgaatattaagaagtca
gaggtccaagcagcagccaggcttgagcttaagagggagccttcaaacagtgaatatatt
aaggtcatgactgatttatgcgaatccaaaggttctgcgtgggtattgaagagtggtgat
ggaaaaccatcatga

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