Populus trichocarpa (black cottonwood): 7478060
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Entry
7478060 CDS
T01077
Name
(RefSeq) heat stress transcription factor B-2b
KO
K09419
heat shock transcription factor, other eukaryote
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7478060
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
7478060
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Paralog
GFIT
Motif
Pfam:
HSF_DNA-bind
HALZ
ZPR
Motif
Other DBs
NCBI-GeneID:
7478060
NCBI-ProteinID:
XP_002298053
UniProt:
B9GKL4
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All DBs
Position
1:8685717..8688180
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AA seq
344 aa
AA seq
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MPPLPVEQTGESPAACGGGAAAGGPPSGSGDSQRSLPTPFLTKTYQLVDDPSVDDLISWN
DDGSTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFANDCFRRGEK
ALLRDIQRRKISPMAASAVTSASVTVAAIPTVARAVSPANSGDDQGISSTSSPGGAGTAG
GANSFLRTTSCTTTPEILEENERLRKENSALSHELTQLRGLCNNIMVLMNNYASPQLEGN
SGNSNNNLAEVKAALELLPVADEVAVSGRPRGGAAATESEVSPRLFGVSIGFKRVRIDEE
EEEEQGNRQQTEGKEHESDVKAEPLDGSSGNSDHQDQRWLDLGK
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgccgccattgcctgtggagcaaactggcgaatcacccgccgcatgtggcggcggagca
gcagctggcggaccaccatcaggatcgggagattcgcaaagatctctcccaactccattt
ttaaccaaaacctatcagctagtcgatgacccgtcggttgatgacttgatttcatggaac
gacgatggatcaaccttcatagtgtggcgtcctgcagagttcgctagagacttgttgcct
aaatatttcaagcacaacaacttctctagcttcgttcgccaactcaacacatacggattt
agaaaggtggtacccgatcgatgggaattcgcgaatgactgtttccggcgaggcgagaaa
gcacttctccgcgatattcagcgcaggaaaatatctccgatggcggcatcagctgtaact
tccgcctccgttacggtcgccgccatccccacggtggcgagagcggtttctcctgctaac
tctggtgatgaccagggaatatcgtccacgtcgtctcctggcggggcagggacggcggga
ggagcaaactcgtttctccggacgacgagctgcacgacgacgccggagattctggaggag
aacgagaggttgaggaaggagaactcggcgctgagccacgagttgactcagttgagaggt
ctgtgtaataatataatggtgttgatgaataattacgcatcccctcagttagagggtaat
agtggaaatagcaataataatttggcggaagtcaaggccgctttggaattgttgccggtg
gcggatgaagtggcggttagtggtagacccaggggcggagcggcggctacggagtcggag
gtgagcccgagactgtttggggtttctattggattcaagcgcgtgaggatagacgaggag
gaggaggaggagcagggtaatcggcaacaaacggaagggaaagagcacgaatctgacgtt
aaagcggagccgctggatggtagttcagggaattcagatcaccaagatcaacggtggtta
gatcttgggaaatga
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