Populus trichocarpa (black cottonwood): 7478066
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Entry
7478066 CDS
T01077
Name
(RefSeq) scarecrow-like protein 28
KO
K27749
protein DWARF and LOW-TILLERING
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7478066
Transcription factors [BR:
pop03000
]
Eukaryotic type
Other transcription factors
GRAS
7478066
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Gene cluster
GFIT
Motif
Pfam:
GRAS
LRRC37
Motif
Other DBs
NCBI-GeneID:
7478066
NCBI-ProteinID:
XP_002299559
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All DBs
Position
1:complement(8814889..8818170)
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AA seq
666 aa
AA seq
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MLAGCSSSTLLSPRHRLRSESPAQFQACHFQLPSMSTQRLDLPCTFSRKESSRSQPIRPV
GVGLSVDKPLESKTSSCSLKQNIRLPPLATSNQSVKDEFWEKGKSLKRFAEQSVDESCIN
RAKRKRGNNDNVKPDDFCEGGDSLSLGQLGSGNFWFQPSLEVPRGLNPQQFPFSLTCSGD
EERVYFVPSEVISPPLPLSNNPWVGSVITEITDLGEKDGESSQRPVKEASGSSTSSESQS
LGLRLSENVVEQEVGNGSRNPHPQEGAAMEAAETDQREFQGFELVSLLTACVEAITLKNI
AGINHFLAELGGLASPKGIPISRLAAYYTEALALRVTRLWPHIFHITAPRELDRVDDDSG
TALRLLNQVSPIPKFIHFTANEMLLRAFEGKDRVHIIDFDIKQGLQWPTLFQSLASRTNP
PSHVRITGIGESKQELNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLWMLHVKERECVA
INCVFQMHKTLYDGSGGALRDFLGLIRSTNPAIVIVAEQEAEHNAPNLETRVCNSLKYYS
ALFDSIDSSLPFDSPVRIKIEEMYAREIRNIVACEGSDRHERHEMLDNWKKLMEQGGLRC
LVISEREMLQSQILLKMYSCDSYQVKKHGQEGAALTLSWLDQPLYTVSAWTPLDIAGSSS
SFSQPS
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgttggccggttgttctagttcaacattgctgtcaccaaggcatagattgaggagtgaa
tcacctgcgcagtttcaagcttgccattttcagttaccttcaatgagcacacagagattg
gacttgccgtgtactttctctcgcaaagaatcatcgcggtcgcagcccattaggcctgtt
ggtgttggcctgtcagtggataaaccacttgagtccaagaccagcagttgctctctcaag
cagaatatcaggctccccccattggcaacaagcaatcaatcagtgaaagatgagttttgg
gagaagggtaagagcttgaagaggtttgcggagcaatcagttgatgagtcttgcattaat
agggctaagagaaaaaggggtaacaatgataatgttaaacctgatgatttttgtgaaggt
ggtgatagtttgagtttaggtcagttggggagcggcaatttttggtttcaaccaagtttg
gaggtgcctagaggccttaaccctcaacaatttcctttctccttgacatgttcaggagat
gaggagagggtttactttgtgcctagtgaagtgatttccccgcctttgccattgtctaac
aatccatgggtgggctctgttataactgagatcactgacctaggtgaaaaggatggagag
agtagccaaaggccagtaaaagaagcctcgggttcaagtacttcatcagagagtcaaagc
ttaggcctcaggctaagcgagaatgtagtggagcaggaagtgggtaatggctctaggaat
cctcatcctcaagaaggtgctgcgatggaggctgcagaaacggaccagagagagtttcag
gggtttgagctagttagcttacttacagcttgtgttgaagcaattacgttgaagaatatc
gctgggatcaaccattttctagctgaattgggggggcttgcttctccgaaaggaattcct
attagccgccttgctgcttattatactgaggccttagctcttagagtcacaaggctttgg
cctcacatctttcatataactgctcctcgggaacttgatcgtgttgacgatgattcaggg
actgcattgaggcttctgaatcaggtgagcccaattccaaaattcattcatttcactgcg
aatgagatgttgttgagggcttttgaagggaaagatagggttcatattatagactttgac
attaagcaagggcttcaatggcctactttgtttcagagtttggcctccaggactaatcct
cctagccatgttagaatcactggtataggcgagtctaagcaagagcttaatgagacagga
gataggcttgctggatttgctgaggcattgaacctgcctttcgagttccatccagttgtg
gacaggttagaagatgtgaggttgtggatgctccatgtgaaggagagggagtgtgtggct
attaattgtgttttccagatgcacaagacactatatgatgggagtggaggagcactgagg
gatttcctgggacttatccgaagcacaaaccccgcaatagtcattgtggcagagcaagaa
gcagaacacaatgcccctaatttggaaacaagagtttgcaattcgttgaagtactactct
gccctatttgactcgattgattctagccttccctttgacagcccggttaggatcaaaata
gaggagatgtatgctcgagaaattaggaacattgttgcttgtgaaggaagtgaccggcat
gaaaggcatgaaatgcttgacaattggaagaagttgatggagcaaggaggcctccggtgc
ttggtaatcagtgagagggaaatgcttcagagccaaattctattgaagatgtactcttgt
gatagttaccaagttaagaagcacgggcaggagggagcggcgcttactctgagttggtta
gatcagcctctctacacagtctcagcgtggacacctttagacattgcagggagttcatcc
tctttttctcagccaagttga
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