Populus trichocarpa (black cottonwood): 7478101
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Entry
7478101 CDS
T01077
Name
(RefSeq) E3 ubiquitin-protein ligase SPL2
KO
K15688
E3 ubiquitin-protein ligase MUL1 [EC:
2.3.2.27
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7478101
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
7478101
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
7478101
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GIDE
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf-RING_2
YdjO
Motif
Other DBs
NCBI-GeneID:
7478101
NCBI-ProteinID:
XP_002298092
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All DBs
Position
1:14407684..14410203
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AA seq
390 aa
AA seq
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MSSRSHEQALAALLSQLALSFDGAILGAALAYAAVRAILNYTANSKSLAKISKAPTLSVS
DLRSLLQNHDQDHQDHEHNLVIVKGIVEAKSAVEWTWKESFRPPKVLLSHNSAYKAVILQ
KTQTCIYNEWKGFLGWTSELRAIFGRSLKEQETTLLRTVPFILVEGAQWPRSDYVIVNMV
GSAHPLPLTTVYHQLQRIAASRYTFIQALFGHEYPVGVLHEEKILPLGKCISAVGICNSK
KGIPEIKSCKDLPYFLADITKDQMVADLAFKAKIQLWSGIVLGSLSIGVLGFAVMRNWNK
WQAWRQRHSHLPNHTTIDADVSRIDEDEAGDVPDGQLCVICLTRRRRSAFIPCGHLACCH
FCAISVESEVSPKCPLCRQAIRNSIRVFEC
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcacgttcccatgagcaagcactggccgccctgctatcccaacttgctctctcc
ttcgacggagcaattctcggggcagctcttgcctacgccgccgtacgtgcaattctcaat
tacactgcaaattccaaatcccttgccaaaatcagcaaggcacccactctttccgtctcc
gacctccgatcgctccttcaaaatcacgatcaagaccaccaggaccatgagcataacctc
gtaattgtcaaaggaatcgttgaggctaaatcagccgttgaatggacatggaaggagagc
tttagaccccctaaggtcttgctttctcataattctgcttataaggcggttattcttcaa
aaaactcaaacttgtatatacaacgaatggaagggctttttaggatggacttccgagttg
cgggctatctttggcagatctttgaaagaacaagaaacaaccttattaagaacggttcct
tttatactagttgaaggtgctcaatggccacggtctgattatgttatcgtgaacatggtc
ggatcagcacaccccctacctcttacaactgtttatcatcagttgcaacgcattgctgct
tctcgttatacattcattcaggcactttttggtcatgaataccctgttggggtgcttcac
gaggagaaaatcctgccattagggaagtgtatcagtgctgttggcatttgcaattctaaa
aaaggaattcctgagataaaatcttgcaaggatcttccctattttctggctgacattacc
aaagatcaaatggtggcagatcttgccttcaaggcgaaaatacagctatggagtggtatt
gttcttggttcactttcaattggggtccttggcttcgctgttatgaggaactggaataaa
tggcaagcgtggaggcaaagacactctcacctgccgaaccatactaccattgatgcagat
gtctctcggattgatgaagatgaagcaggagatgtgccagatggacagttgtgtgtgatc
tgcttaacgaggagaaggcgatctgcattcattccctgtgggcatcttgcatgctgtcat
ttctgtgctatatcagttgaaagtgaggtatcccccaaatgccctctctgtaggcaggca
atccgaaattctatcagggtttttgaatgttga
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