Populus trichocarpa (black cottonwood): 7478107
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Entry
7478107 CDS
T01077
Name
(RefSeq) ubiquitin-like protein ATG12 isoform X2
KO
K08336
ubiquitin-like protein ATG12
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
7478107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7478107
04121 Ubiquitin system [BR:
pop04121
]
7478107
03029 Mitochondrial biogenesis [BR:
pop03029
]
7478107
Membrane trafficking [BR:
pop04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
7478107
Ubiquitin system [BR:
pop04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitin-like proteins (UBLs)
7478107
Mitochondrial biogenesis [BR:
pop03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
7478107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APG12
ILEI
Motif
Other DBs
NCBI-GeneID:
7478107
NCBI-ProteinID:
XP_002299593
UniProt:
B9GKV2
LinkDB
All DBs
Position
1:complement(14539156..14542002)
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AA seq
94 aa
AA seq
DB search
MEIESQDSARKVIIQLKATADAPILKQKKFKMLGTDKFAKVIDFLRRQIHRETVFVYINS
AFSPNPDELVIDLFNNFGVDGKLLVNYACSVAWG
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atggagattgaatcacaggattctgctcgaaaagtgattattcagttaaaagccactgct
gatgcgcctattctcaagcaaaagaagttcaagatgcttggaactgataagtttgctaaa
gtgattgactttttgcgtcggcaaattcacagggagaccgtgtttgtatacatcaacagc
gcattctcaccaaatccagatgaattggtgattgatctgtttaataatttcggcgttgat
ggtaaactgctggtcaactatgcctgttcagtggcgtggggctaa
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