Populus trichocarpa (black cottonwood): 7478178
Help
Entry
7478178 CDS
T01077
Name
(RefSeq) PHD finger protein Alfin1
KO
K26274
PHD finger protein ALFIN-LIKE
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7478178
Transcription factors [BR:
pop03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
7478178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alfin
PHD
C1_1
PHD_NSD
zf-RING_2
KH_PARP14_3
C1_2
Motif
Other DBs
NCBI-GeneID:
7478178
NCBI-ProteinID:
XP_002303216
UniProt:
B9GVE0
LinkDB
All DBs
Position
3:5071649..5076283
Genome browser
AA seq
254 aa
AA seq
DB search
MEAIPHPIPRTVEEVFSDFKGRRSGLIKALTTDVEKFYQQCDPDKENLCLYGLPNETWEV
NLPVEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNER
KRLFQMINELPTIFEVVSGNVKQPKDQSATHNNSGKSKSSGKMQSRQPESQTKAVKVSAP
PKEDYESGEEEEEDDEQGATCGACGESYGTDEFWICCDICEKWFHGKCVKITPAKAEHIK
QYKCPSCSGKRARV
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggaggcaataccgcacccaataccgcgaactgttgaagaagtttttagtgattttaaa
ggaagacgctctggtttaatcaaggctctcactaccgatgttgagaagttttaccagcag
tgtgaccctgataaggagaacttgtgcctatatggactcccaaatgaaacatgggaagtt
aatctgcctgtggaggaggtgcctcctgagcttcctgagcctgcactaggtataaatttt
gctagggatgggatgcaagagaaagactggttatcccttgttgcagttcacagcgattca
tggttgcttgctgttgcattttattttggtgcacgttttgggtttgggaagaatgaaagg
aagaggcttttccagatgataaatgagctccccacaatattcgaggttgtgtccggaaat
gttaagcaacctaaggaccaatctgccactcacaacaacagtggcaaaagcaaatcaagc
gggaagatgcaatcccggcaacctgagtcccagactaaggcagtaaaggtatctgcacca
cccaaggaagactatgagagtggggaagaggaagaagaagatgacgaacagggtgctact
tgcggagcatgtggtgaaagctatggcactgatgaattctggatttgctgtgatatttgc
gagaaatggttccatgggaaatgcgtcaagattacacctgccaaagctgagcatatcaag
cagtacaagtgcccaagttgcagtggcaagagggctagagtttaa
DBGET
integrated database retrieval system
