Populus trichocarpa (black cottonwood): 7478179
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Entry
7478179 CDS
T01077
Name
(RefSeq) protein STICHEL
Organism
pop
Populus trichocarpa (black cottonwood)
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DnaA_N-like_STI
AAA
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA_18
AAA_22
RCF1-5-like_lid
RuvB_N
AAA_30
AAA_16
AAA_14
GlnD_UR_UTase
AAA_5
Motif
Other DBs
NCBI-GeneID:
7478179
NCBI-ProteinID:
XP_002303217
UniProt:
A0A2K2B1G6
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Position
3:5108129..5115875
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AA seq
1241 aa
AA seq
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MSEMRFSDPSRLHLKKELTQIRKAARVLRDPGTTSSWKSARSAAAASTSASAWKHFENEN
AIQNGGTTASHSNNSSTHLGSHFKSVLNNNGSDKKVFLYNWKSQKYSSEKSALPRNDADD
NCESCSVQESLDDSLSDARNVGDSKSDTYLGETRSPAMIFRRRDANLVSPSMRRAMGVKK
KGKKTNTRLDVLSRYQEKEMNLRRLLKGHPSMGLSLGLGRDAIVEQSDDTEEYSNSEDLR
KISGASPLLLKLKHKNWSHSPSKFLRTSRKEDSSYCHSTPALSTSSCNKYRNRNPSTVGS
WDATTTSMNDGDDEDGDHLDLPGRHGCGIPCYWSKRTPRYRGVCGSSCCSPSLSDTLRRK
GSSMLCGSQSMYHRRLRSCSLSNKRRIGSRTGQAFLPLLADSGDGIGGSSIGTGHSDDEL
STNYGELDLEALCRLDGRRWSSCRNQDGLEIVALNGDGEDEGTVQNIRSLSQKYKPAFFS
ELIGQNIVVQSLINAISRGRIARVYLFQGPRGTGKTSAARIFASALNCMSTEEIKPCGCC
RECNDSSSGKTRDLWEVDGTDKKGIDKVRYLLKKISRGPPLGSSRYKVFLIDECHLLPSK
MWLAFLKFLEEPPQRVVFIFVTTDPDNVPRTVQSRCQKYLFSKIKDRDIVARLRKISNEE
NLDVELNALDLIALNADGSLRDAETMLDQLSLLGKKITTSLVNELVGDVSDEKLLELLEL
AMSSETAETVKRARDLMDSGIDPMVLMSQLASLIMDIIAGTYNVVYAKHGDSLIGTQNLT
EAELERLKHALRLLSEAEKQLRISSDRSTWFTATLLQLGSTPSMDLTLSSSSRRQSSRTT
EEDPSSVSKESNVYKPNSDAQYFPRRSSSPSSLYRAINGHSSHQGEYEFNAKPPRLMDSN
DEMTGNKVFRYKNSDKLDDIWEKCIEKCHSQTLRQLLHAHGKLLSISEVDGALAVYVAFE
DEDIKARAERFLSSITNSIEIVLRCNVEVRIVLVSDGLDSLIYANQSELQEGHRQTETTL
ANERGGKANWSGAVVGYSDLESQEESAKLSRGSFNDANAGEKQEMPMQRIESIIREQRLE
TAWLQVAEKGTPGSLSHLKPEKNQVLPQEDTYQQNQMESIDSATLSSQKWEDELNHELKV
LKMQDQRVLRKDQIGKMVDYYPMSPSLLHGSSYVANGSKESLGYESSSAGGGCSGLFCWN
NSRSNRAKAKATPVGPRGRSGRFSLFGECAKQKKSESRNTR
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaatgagattttctgatccaagcagacttcacttaaagaaggagctcactcaa
atcagaaaggcagctagagttttgagagatccaggtacaacttcttcatggaagtcagct
agatctgcagcagcagcttctacttctgcttctgcttggaaacattttgagaatgagaat
gcaatccaaaatggtggtactactgctagtcatagtaacaatagcagcacccatttgggt
tcccatttcaagagtgtgctcaataataatgggagcgacaaaaaagtgttcctttacaat
tggaagtcgcagaaatattccagtgagaagagcgcattgccaaggaatgatgctgatgat
aactgtgagtcttgttcagttcaagagagccttgatgatagcctgagtgatgcaagaaac
gtcggggattcgaagagtgacacgtatttgggtgagacaaggtctcctgcaatgattttc
agacgtagagacgcaaatctcgtgtcgccatccatgagaagagcaatgggcgtcaagaaa
aagggtaagaaaactaatactcgtctggatgttctgtctagatatcaagaaaaagagatg
aacttgaggcgattacttaagggccatccttcaatgggtttgagtttaggtttaggaagg
gatgctattgttgaacaatctgatgatactgaagaatatagtaattcagaggatttaaga
aagatttctggggcatcgccattgttactaaaacttaagcataagaactggtcacattct
ccttctaaatttctgagaaccagtcgaaaagaggactcttcttattgtcacagcacacct
gcattgtcaactagttcttgtaacaagtaccgtaatcgtaacccgagcacagttggatct
tgggacgccaccacaacctcaatgaatgacggggatgacgaggatggtgatcacttggat
ttacctggtcgccatggatgtgggattccttgctattggtccaaacggacaccaagatac
agaggtgtatgtgggagtagttgttgctcaccttccctttcagatactttaaggagaaaa
ggaagtagcatgttgtgtggtagtcagtcaatgtatcatagacgcctacgttcatgttca
ctttctaataagcgcagaattggttcaagaactggacaagcatttctccctttgcttgcg
gacagtggtgatggcataggagggtcatcgataggtactggtcatagcgatgatgagctt
tctacaaactacggggaacttgatttggaggcattgtgcagattggatggtaggaggtgg
tccagttgcaggaatcaagacgggctggagatcgtggctttaaatggagacggagaagat
gaaggcacggttcaaaatatcagaagtttaagccagaaatacaagccagctttcttcagt
gaactgattgggcaaaacattgttgttcaatcacttatcaatgctatttctaggggaaga
atagctcgggtttatcttttccaaggtccacgaggcactggtaaaacatcagcagctagg
atttttgcctctgctttaaactgcatgtctactgaagaaataaaaccttgtgggtgctgc
agagaatgcaatgattccagttctgggaagaccagggatctatgggaagttgatggcact
gacaagaagggaattgataaagttagatatcttctgaagaaaatttcgcgtgggcctcca
ttgggctcttcacgttacaaggtttttcttattgatgaatgtcacttgttgccctctaag
atgtggctggcatttctcaaatttcttgaagaaccaccacagcgagttgtgttcatattt
gtaacaaccgatcctgacaatgtacctcgtactgtacaatcacggtgtcagaagtacctc
ttcagcaaaattaaagatcgagatattgtagcaaggttgaggaaaatttctaacgaggag
aatcttgatgttgaattgaatgccctggatttgattgctttgaatgctgatggttcactt
cgagatgcagaaacaatgttagaccagttgagtttgctcgggaagaagataactacttct
cttgtaaatgaattggtgggggatgtttcagatgagaaattactggaacttttggaatta
gcaatgtcttcagagactgctgaaacagtgaaaagggccagggatttgatggactctggc
attgatccaatggttttgatgtctcaactggccagcctcattatggatattattgctggg
acatacaatgttgtttatgccaagcatggtgattcactcattggtacacagaatttgact
gaagcagaactggagagactaaagcatgctttgaggcttctttcagaggctgagaaacag
ctaaggatctcaagtgaccgctcaacatggttcacagcaactcttctacagcttggttcc
acaccttcaatggatctcactctgtcaagcagtagtaggaggcagagctccaggacaact
gaggaagatccttcaagtgtttcaaaggaatccaatgtttacaagccaaactcagatgct
caatattttccccggagatcaagttcgccttcttccttgtacagggcaataaatggacat
tccagccaccaaggggaatatgaatttaatgccaaaccccctcgattgatggatagcaat
gatgaaatgactggaaataaggtatttaggtacaaaaactcagacaagttggatgatata
tgggagaaatgtattgaaaagtgtcactcacagacattgaggcagcttctacatgctcat
ggaaagcttctgtccatatctgaagtggatggagcccttgctgtttatgttgcatttgaa
gatgaagatattaaagccagagctgaaaggtttctgagcagtatcacaaattcaatcgag
attgtccttagatgcaatgtagaggttagaattgttcttgtgtcagatggtctggattct
ttgatttatgcaaaccaatctgagttacaagaaggtcataggcaaacagaaacaactttg
gcaaatgaacggggtgggaaggctaattggtctggtgcagtagttggttattcagattta
gaatcacaagaagagtccgcaaaattatccagaggaagctttaatgatgccaatgctgga
gagaagcaggaaatgccgatgcagagaatagaatcaattatccgtgagcagaggttagaa
actgcctggttacaggtggcagagaagggaacccctggatcattgagtcatctgaaacct
gagaagaatcaggtgttgcctcaagaggacacttatcaacaaaatcaaatggagtccata
gattcagcgacactgtcatctcagaaatgggaagatgaattaaatcatgaactcaaagta
ttgaagatgcaggatcagagggtgctccgcaaggatcagataggaaaaatggtggattat
tatccaatgtcaccaagcttgttacatggcagcagctatgtggccaatggaagcaaagaa
agcctgggatatgaatcgagttcggctggtggaggttgcagcgggctcttctgttggaac
aacagtagatctaatcgggcaaaggccaaagcgaccccagttggacctcgaggcagaagt
gggcgattttcattgtttggtgagtgtgcaaagcaaaagaaatctgagagcagaaataca
agatga
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