KEGG   Populus trichocarpa (black cottonwood): 7478182
Entry
7478182           CDS       T01077                                 
Name
(RefSeq) ESCRT-related protein CHMP1B
  KO
K12197  charged multivesicular body protein 1
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03272  Virion - Hepatitis viruses
pop04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    7478182
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    7478182
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pop04131]
    7478182
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pop04147]
    7478182
Membrane trafficking [BR:pop04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    7478182
Exosome [BR:pop04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   7478182
  Exosomal proteins of other body fluids (saliva and urine)
   7478182
  Exosomal proteins of colorectal cancer cells
   7478182
SSDB
Motif
Pfam: Snf7 Ist1 Ham1p_like
Other DBs
NCBI-GeneID: 7478182
NCBI-ProteinID: XP_002303220
UniProt: B9GVN3
LinkDB
Position
3:5185154..5186289
AA seq 203 aa
MGNTDKLLNQIMDLKFTSKSLQRQSRKCEKEEKSEKLKVKKAIEKGNMDGARIYAENAIR
KRTEQMNYLRLSSRLDAVVARLDTQAKMTTINKSMGSIVKSLESTLATGNLQKMSETMDQ
FEKQFVNMEVQAEFMESSMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAAHAVA
TSSQEKVGEDDLSRRLAELKAKG
NT seq 612 nt   +upstreamnt  +downstreamnt
atgggaaacacagataagcttttgaatcagatcatggacttgaaattcacatcgaaatcg
ctgcaaaggcagtcaaggaagtgcgagaaggaagagaaatcggagaaattgaaagtgaag
aaggcgatcgagaaaggaaacatggacggtgctcggatctatgctgagaacgccattcgt
aagaggactgaacagatgaattacttgaggctctcctccaggctcgatgccgttgtcgct
aggcttgatactcaggctaagatgaccaccattaacaagtccatgggttctattgttaag
tccctcgagtctactctcgctactggtaatttgcagaagatgtcggagacaatggatcag
tttgagaagcagtttgtgaatatggaggtgcaggcagagttcatggagagttctatggct
gggtctacctccctttccacacctgagggtgaggtcaacagcttgatgcagcaggtagct
gatgactatggattggaggtctctgttgggctgccacagcctgctgctcatgcagtggca
accagttcgcaggagaaggtgggtgaggatgatttatcaaggcggcttgcagagcttaag
gccaaagggtaa

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